Soil water status is one of the most important environmental factors that control microbial activity and rate of soil organic matter (SOM) decomposition. Its effect can be partitioned into effect of water energy status (water potential) on cellular activity, effect of water volume on cellular motility, and aqueous diffusion of substrate and nutrients, as well as the effect of air content and gas-diffusion pathways on concentration of dissolved oxygen. However, moisture functions widely used in SOM decomposition models are often based on empirical functions rather than robust physical foundations that account for these disparate impacts of soil water. The contributions of soil water content and water potential vary from soil to soil according to the soil water characteristic (SWC), which in turn is strongly dependent on soil texture and structure. The overall goal of this study is to introduce a physically based modeling framework of aerobic microbial respiration that incorporates the role of SWC under arbitrary soil moisture status. The model was tested by comparing it with published datasets of SOM decomposition under laboratory conditions.

Hydraulic redistribution (HR) by woody vegetation has been proposed as a potential water source for crops in intercropped systems. The native woody shrub, Guiera senegalensis J.F. Gmel, grows in the fields of farmers across the African Sahel and has shown profound yield benefits to associated pearl millet (Pennisetum glaucum) crops, especially in drought years. We tested whether this benefit resulted from the shrubs performing hydraulic redistribution (HR) with pearl millet using some of this HR water. During an experimentally imposed drought, an enriched deuterium (²H) water tracer applied to 1 m deep roots of G. senegalensis shrubs was detected (²H ≥ +300‰) in aboveground stems of intercropped millet within 12–96 h of tracer introduction. The only viable path for the ²H-enriched H₂O into millet was via HR by the shrubs, which confirmed active HR during the time when growing millet was under severe drought stress. Millet biomass production when intercropped with shrubs was over 900% greater than crops grown without shrubs present. Improvement of growing conditions previously found near shrubs cannot fully account for the benefit to associated millet under extreme drought stress without considering the positive impact of the transfer of HR water. This finding illuminates HR and water transfer as an important mechanism in a successful agroforestry system in a region where food security is a serious issue.

Most plants derive their water and nutrient needs from soils where the resources are often scarce, patchy, and ephemeral. It is not uncommon for plant roots to encounter mismatched patches of water-rich and nutrient-rich regions in natural environments. Such an uneven distribution of resources necessitates plant reliance on strategies for exploring and acquiring nutrients from relatively dry patches. We conducted a laboratory study that elucidates the biophysical mechanisms that enable this adaptation. The roots of tomato (Solanum lycopersicum) seedlings were laterally split and grown in two adjacent, hydraulically disconnected pots, which permitted precise control of water and nutrient applications to each compartment. We observed that the physical separation of water-rich and nutrient-rich compartments (one received 90 % water and 0 % nutrients and the other received 10 % water and 100 % nutrients) does not significantly stunt plant growth and productivity compared to two control treatments (control 1: 90 % water and 100 % nutrients versus 10 % water and 0 % nutrients; control 2: 50 % water and 50 % nutrients in each compartment). Specifically, we showed that soil dryness does not reduce nutrient uptake, vegetative growth, flowering, and fruiting compared to control treatments. We identified localized root proliferation in nutrient-rich dry soil patches as a critical strategy that enabled nutrient capture. We observed nocturnal rewetting of the nutrient-rich but dry soil zone (10 % water and 100 % nutrients) but not in the nutrient-free and dry zone of the control experiment (90 % water and 100 % nutrients). We interpreted the rewetting as the transfer of water from the wet to dry zones through roots, a process commonly known as hydraulic redistribution (HR). The occurrence of HR likely prevents the nutrient-rich soil from drying due to permanent wilting and the subsequent decline of root functions. Sustaining rhizosphere wetness is also likely to increase nutrient mobility and uptake. Lack of HR in the absence of nutrients suggests that HR is not entirely a passive, water-potential-gradient driven flow. The density and size of root hairs appeared to be higher (qualitative observation) in the nutrient-rich and dry compartments than in the nutrient-free and dry compartments. We also observed organic coating on sand grains in the rhizosphere of the nutrient-rich and dry compartments. The observations are consistent with prior observations that root hairs and rhizodeposition aid rhizosphere wetting. These findings were synthesized in a conceptual model that explains how plants of dry regions may be adapted to mismatched resources. This study also suggests that separating the bulk of applied nutrients from the frequently irrigated soil region can increase nutrient use efficiency and curtail water pollution from intensive agricultural systems.

Subsoil carbon (C) stocks are a prime target for efforts to increase soil C storage for climate change mitigation. However, subsoil C dynamics are not well understood, especially in soils under long-term intensive agricultural management. We compared subsoil C storage and soil organic matter (SOM) composition in tomato–corn rotations after 25 years of differing C and nutrient management in the California Central Valley: CONV (mineral fertilizer), CONV+WCC (mineral fertilizer and cover crops), and ORG (composted poultry manure and cover crops). The cover crop mix used in these systems is a mix of oat (Avena sativa L.), faba bean (Vicia faba L.), and hairy vetch (Vicia villosa Roth). Our results showed a ∼19 Mg ha⁻¹ increase in soil organic C (SOC) stocks down to 1 m under ORG systems, no significant SOC increases under CONV+WCC or CONV systems, and an increased abundance of carboxyl-rich C in the subsoil (60–100 cm) horizons of ORG and CONV+WCC systems. Our results show the potential for increased subsoil C storage with compost and cover crop amendments in tilled agricultural systems and identify potential pathways for increasing C transport and storage in subsoil layers.

Increasing soil organic carbon (SOC) stocks in agricultural soils can contribute to stabilizing or even lowering atmospheric greenhouse gas (GHG) concentrations. Cover crop rotation has been shown to increase SOC and provide productivity benefits for agriculture. Here we used a split field design to evaluate the short-term effect of cover crop on SOC distribution and chemistry using a combination of bulk, isotopic, and spectroscopic analyses of size-and density-separated soil aggregates. Macroaggregates (>250 µm) incorporated additional plant material with cover crop as evidenced by more negative δ¹³C values (−25.4‰ with cover crop compared to −25.1‰ without cover crop) and increased phenolic (plant-like) resonance in carbon NEXAFS spectra. Iron EXAFS data showed that the Fe pool was composed of 17–21% Fe oxide with the remainder a mix of primary and secondary minerals. Comparison of oxalate and dithionite extractions suggests that cover crop may also increase Fe oxide crystallinity, especially in the dense (>2.4 g cm⁻³) soil fraction. Cover crop δ¹³C values were more negative across density fractions of bulk soil, indicating the presence of less processed organic carbon. Although no significant difference was observed in bulk SOC on a mass per mass basis between cover and no cover crop fields after one season, isotopic and spectroscopic data reveal enhanced carbon movement between aggregates in cover crop soil.