Yuri. Dorokhov

Dr. Yuri. Dorokhov

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Research Focus & Metrics

Academic Career Length

35Years (1992-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2010 in Expert Review of Vaccines
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Journal Article
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TKTatiana V Komarova
Tatiana V Komarova
SBSelene Baschieri
Selene Baschieri
MDMarcello Donini
Marcello Donini
CMCarla Marusic
Carla Marusic
EBEugenio Benvenuto
Eugenio Benvenuto
YDYuri. Dorokhov
Yuri. Dorokhov
In the molecular farming area, transient expression approaches for pharmaceutical proteins production, mainly recombinant monoclonal antibodies and vaccines, were developed almost two decades ago and, to date, these systems basically depend on Agrobacterium-mediated delivery and virus expression machinery. We survey here the current state-of-the-art of this research field. Several vectors have been designed on the basis of DNA- and RNA-based plant virus genomes and viral vectors are used both as single- and multicomponent expression systems in different combinations depending on the protein of interest. The obvious advantages of these systems are ease of manipulation, speed, low cost and high yield of proteins. In addition, Agrobacterium-mediated expression also allows the production in plants of complex proteins assembled from subunits. Currently, the transient expression methods are preferential over any other transgenic system for the exploitation of large and unrestricted numbers of plants in a contained environment. By designing optimal constructs and related means of delivery into plant cells, the overall technology plan considers scenarios that envisage high yield of bioproducts and ease in monitoring the whole spectrum of upstream production, before entering good manufacturing practice facilities. In this way, plant-derived bioproducts show promise of high competitiveness towards classical eukaryotic cell factory systems.

9 November 2018 in Frontiers in Plant Science
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Journal Article
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YDYuri. Dorokhov
Yuri. Dorokhov
ESEkaterina Sheshukova
Ekaterina Sheshukova
TKTatiana V. Komarova
Tatiana V. Komarova
Until recently, plant-emitted methanol was considered a biochemical by-product, but studies in the last decade have revealed its role as a signal molecule in plant-plant and plant-animal communication. Moreover, methanol participates in metabolic biochemical processes during growth and development. The purpose of this review is to determine the impact of methanol on the growth and immunity of plants. Plants generate methanol in the reaction of the demethylation of macromolecules including DNA and proteins, but the main source of plant-derived methanol is cell wall pectins, which are demethylesterified by pectin methylesterases (PMEs). Methanol emissions increase in response to mechanical wounding or other stresses due to damage of the cell wall, which is the main source of methanol production. Gaseous methanol from the wounded plant induces defense reactions in intact leaves of the same and neighboring plants, activating so-called methanol-inducible genes (MIGs) that regulate plant resistance to biotic and abiotic factors. Since PMEs are the key enzymes in methanol production, their expression increases in response to wounding, but after elimination of the stress factor effects, the plant cell should return to the original state. The amount of functional PMEs in the cell is strictly regulated at both the gene and protein levels. There is negative feedback between one of the MIGs, aldose epimerase-like protein, and PME gene transcription; moreover, the enzymatic activity of PMEs is modulated and controlled by PME inhibitors (PMEIs), which are also induced in response to pathogenic attack.

5 April 2012 in PLOS Pathogens
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YDYuri. Dorokhov
Yuri. Dorokhov
TKTatiana V. Komarova
Tatiana V. Komarova
IPIgor V. Petrunia
Igor V. Petrunia
OFOlga Y. Frolova
Olga Y. Frolova
DPDenis Pozdyshev
Denis Pozdyshev
YGYuri Y. Gleba
Yuri Y. Gleba
Many plants release airborne volatile compounds in response to wounding due to pathogenic assault. These compounds serve as plant defenses and are involved in plant signaling. Here, we study the effects of pectin methylesterase (PME)-generated methanol release from wounded plants (“emitters”) on the defensive reactions of neighboring “receiver” plants. Plant leaf wounding resulted in the synthesis of PME and a spike in methanol released into the air. Gaseous methanol or vapors from wounded PME-transgenic plants induced resistance to the bacterial pathogen Ralstonia solanacearum in the leaves of non-wounded neighboring “receiver” plants. In experiments with different volatile organic compounds, gaseous methanol was the only airborne factor that could induce antibacterial resistance in neighboring plants. In an effort to understand the mechanisms by which methanol stimulates the antibacterial resistance of “receiver” plants, we constructed forward and reverse suppression subtractive hybridization cDNA libraries from Nicotiana benthamiana plants exposed to methanol. We identified multiple methanol-inducible genes (MIGs), most of which are involved in defense or cell-to-cell trafficking. We then isolated the most affected genes for further analysis: β-1,3-glucanase (BG), a previously unidentified gene (MIG-21), and non-cell-autonomous pathway protein (NCAPP). Experiments with Tobacco mosaic virus (TMV) and a vector encoding two tandem copies of green fluorescent protein as a tracer of cell-to-cell movement showed the increased gating capacity of plasmodesmata in the presence of BG, MIG-21, and NCAPP. The increased gating capacity is accompanied by enhanced TMV reproduction in the “receivers”. Overall, our data indicate that methanol emitted by a wounded plant acts as a signal that enhances antibacterial resistance and facilitates viral spread in neighboring plants. The mechanical wounding of plant leaves, which is one of the first steps in pathogen infection and herbivore attack, activates signal transduction pathways and airborne signals to fend off harmful organisms. The mechanisms by which these signals promote plant immunity remain elusive. Here, we demonstrate that plant leaf wounding results in the synthesis of a cell wall enzyme, pectin methylesterase (PME), causing the plant to release methanol into the air. Gaseous methanol or vapors from wounded PME-transgenic plants induced resistance to the bacterial pathogen Ralstonia solanacearum in the leaves of non-wounded neighboring “receiver” plants. To investigate the mechanism underlying this phenomenon, we identified the methanol inducible genes (MIGs) in Nicotiana benthamiana, most of which fell into the category of defense genes. We selected and isolated the following genes: non-cell-autonomous pathway protein (NCAPP), β-1,3-glucanase (BG), and the previously unidentified MIG-21. We demonstrated that BG, MIG-21 and NCAPP could enhance cell-to-cell communication and Tobacco mosaic virus (TMV) RNA accumulation. Moreover, gaseous methanol or vapors from wounded plants increased TMV reproduction in “receivers”. Thus, methanol emitted by a wounded plant enhances antibacterial resistance as well as cell-to-cell communication that facilitate virus spreading in neighboring plants.

16 June 2006 in FEBS Letters
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Journal Article
Closed access
YDYuri. Dorokhov
Yuri. Dorokhov
OFOlga Y. Frolova
Olga Y. Frolova
ESEugene V. Skurat
Eugene V. Skurat
PIPeter A. Ivanov
Peter A. Ivanov
TGTatjana V. Gasanova
Tatjana V. Gasanova
JAJoseph G. Atabekov
Joseph G. Atabekov

3 March 2011 in PLOS ONE
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Journal Article
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TKTatiana V. Komarova
Tatiana V. Komarova
VKVyacheslav S. Kosorukov
Vyacheslav S. Kosorukov
OFOlga Y. Frolova
Olga Y. Frolova
IPIgor V. Petrunia
Igor V. Petrunia
KSKsenia A. Skrypnik
Ksenia A. Skrypnik
YDYuri. Dorokhov
Yuri. Dorokhov
Plant biotechnology provides a valuable contribution to global health, in part because it can decrease the cost of pharmaceutical products. Breast cancer can now be successfully treated by a humanized monoclonal antibody (mAb), trastuzumab (Herceptin). A course of treatment, however, is expensive and requires repeated administrations of the mAb. Here we used an Agrobacterium-mediated transient expression system to produce trastuzumab in plant cells. We describe the cloning and expression of gene constructs in Nicotiana benthamiana plants using intron-optimized Tobacco mosaic virus- and Potato virus X-based vectors encoding, respectively, the heavy and light chains of trastuzumab. Full-size antibodies extracted and purified from plant tissues were tested for functionality and specificity by (i) binding to HER2/neu on the surface of a human mammary gland adenocarcinoma cell line, SK-BR-3, in fluorescence-activated cell sorting assay and (ii) testing the in vitro and in vivo inhibition of HER-2-expressing cancer cell proliferation. We show that plant-made trastuzumab (PMT) bound to the Her2/neu oncoprotein of SK-BR-3 cells and efficiently inhibited SK-BR-3 cell proliferation. Furthermore, mouse intraperitoneal PMT administration retarded the growth of xenografted tumors derived from human ovarian cancer SKOV3 Her2+ cells. We conclude that PMT is active in suppression of cell proliferation and tumor growth.

1 May 2007 in Tuberculosis
Verified
Journal Article
Closed access
YDYuri. Dorokhov
Yuri. Dorokhov
ASAnna A. Sheveleva
Anna A. Sheveleva
OFOlga Y. Frolova
Olga Y. Frolova
TKTatjana V. Komarova
Tatjana V. Komarova
AZAnna S. Zvereva
Anna S. Zvereva
JAJoseph G. Atabekov
Joseph G. Atabekov