Nelson José de Oiliveira Simões

Prof. Nelson José de Oiliveira Simões

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Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 June 2020 in Insects
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SESara Eliáš
Sara Eliáš
JHJana Hurychová
Jana Hurychová
DTDuarte Toubarro
Duarte Toubarro
Jorge FriasJorge Frias
Jorge Frias
MKMartin Kunc
Martin Kunc
PHPavel Hyrsl
Pavel Hyrsl
Entomopathogenic nematodes (EPNs) are efficient insect parasites, that are known for their mutualistic relationship with entomopathogenic bacteria and their use in biocontrol. EPNs produce bioactive molecules referred to as excreted/secreted products (ESPs), which have come to the forefront in recent years because of their role in the process of host invasion and the modulation of its immune response. In the present study, we confirmed the production of ESPs in the EPN Heterorhabditis bacteriophora, and investigated their role in the modulation of the phenoloxidase cascade, one of the key components of the insect immune system. ESPs were isolated from 14- and 21-day-old infective juveniles of H. bacteriophora, which were found to be more virulent than newly emerged nematodes, as was confirmed by mortality assays using Galleria mellonella larvae. The isolated ESPs were further purified and screened for the phenoloxidase-inhibiting activity. In these products, a 38 kDa fraction of peptides was identified as the main candidate source of phenoloxidase-inhibiting compounds. This fraction was further analyzed by mass spectrometry and the de novo sequencing approach. Six peptide sequences were identified in this active ESP fraction, including proteins involved in ubiquitination and the regulation of a Toll pathway, for which a role in the regulation of insect immune response has been proposed in previous studies.

22 May 2025 in Genes
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DTDuarte Toubarro
Duarte Toubarro
EKEric Kenney
Eric Kenney
CHChrista Heryanto
Christa Heryanto
SMSreeradha Mallick
Sreeradha Mallick
Nelson José de Oiliveira SimõesNelson José de Oiliveira Simões
Nelson José de Oiliveira Simões
IEIoannis Eleftherianos
Ioannis Eleftherianos
Background: Heterorhabditis bacteriophora entomopathogenic nematodes are commonly used in agricultural practices for the biological control of insect pests. These parasites are also used in basic research for unveiling the molecular basis of nematode parasitism in relation to the insect anti-nematode response. We have recently shown that H. bacteriophora excreted–secreted products reduce the expression of the antimicrobial peptide gene Diptericin in Drosophila melanogaster, which increases fly mortality due to enhanced propagation of the mutualistic bacteria Photorhabdus luminescens. However, the effect of entomopathogenic nematode extracellular vesicles (EVs) on the insect host defense remains unknown. Methods: Here, we injected adult flies with H. bacteriophora EVs and used quantitative RT-PCR together with gene-specific primers to analyze the activity of immune-related signaling pathways. Results: We found that H. bacteriophora EVs are lethal to Drosophila melanogaster, and they downregulate the expression of Attacin, Cecropin, and Prophenoloxidase 3 in adult flies. Conclusions: These findings build on previous knowledge and strengthen the notion that H. bacteriophora entomopathogenic nematodes release a variety of effector molecules to modify the insect’s innate immune signaling. This information is important because it contributes toward clarifying the molecular interplay between entomopathogenic nematode components and the host’s innate immune system.

23 July 2021 in Applied Sciences
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Claudia BotelhoClaudia Botelho
Claudia Botelho
PFPedro Ferreira-Santos
Pedro Ferreira-Santos
DTDuarte Toubarro
Duarte Toubarro
HDHugo Dinis
Hugo Dinis
HOHugo Osorio
Hugo Osorio
José TeixeiraJosé Teixeira
José Teixeira
FAO estimates that in 2030 the poultry meat production could reach 120 million tons, which is a challenge in terms of waste management. Feathers are mainly composed of keratin, an important biomaterial. Using feathers as a source of keratin will minimize the waste generated, while contributing to supply an important material for several industries, such as pharmaceutical and biomedical. The peptides were extracted from the feathers by microbial degradation. In this study, we evaluated the peptides effect on keratinocyte metabolic activity and migration. The influence of these peptides on non-activated and activated macrophages was also assessed. It was demonstrated that depending on the keratin peptide fraction in contact with keratinocytes, it is possible to modulate the migration rate of the keratinocytes. Peptide fraction with low molecular weight increases migration, while peptides with a high range of molecular sizes decreases it. Some peptide fractions induce the secretion of TNF-α in non-activated macrophages and not on activated macrophages, demonstrating that these peptides should only be placed in contact with cells, in the context of an ongoing inflammatory process. This work is a step forward on the understanding of keratin peptides influence on keratinocytes and immune cells system cells, macrophages.

2 November 2022 in Toxins
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Jorge FriasJorge Frias
Jorge Frias
DTDuarte Toubarro
Duarte Toubarro
GBGro Bjerga
Gro Bjerga
PPPål Puntervoll
Pål Puntervoll
Joao VicenteJoao Vicente
Joao Vicente
Nelson José de Oiliveira SimõesNelson José de Oiliveira Simões
Nelson José de Oiliveira Simões
Entomopathogenic nematodes are used as biological control agents against a broad range of insect pests. We ascribed the pathogenicity of these organisms to the excretory/secretory products (ESP) released by the infective nematode. Our group characterized different virulence factors produced by Steinernema carpocapsae that underlie its success as an insect pathogen. A novel ShK-like peptide (ScK1) from this nematode that presents high sequence similarity with the ShK peptide from a sea anemone was successfully produced recombinantly in Escherichia coli. The secondary structure of ScK1 appeared redox-sensitive, exhibiting a far-UV circular dichroism spectrum consistent with an alpha-helical secondary structure. Thermal denaturation of the ScK1 allowed estimating the melting temperature to 59.2 ± 0.1 °C. The results from toxicity assays using Drosophila melanogaster as a model show that injection of this peptide can kill insects in a dose-dependent manner with an LD50 of 16.9 µM per adult within 24 h. Oral administration of the fusion protein significantly reduced the locomotor activity of insects after 48 h (p < 0.05, Tukey’s test). These data show that this nematode expresses insecticidal peptides with potential as next-generation insecticides.

31 July 2023 in Microorganisms
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Jorge FriasJorge Frias
Jorge Frias
AGAnna Garriga
Anna Garriga
ÁPÁngel Peñalver
Ángel Peñalver
MTMário Teixeira
Mário Teixeira
RBRubén Beltrí
Rubén Beltrí
Nelson José de Oiliveira SimõesNelson José de Oiliveira Simões
Nelson José de Oiliveira Simões
Popillia japonica (Coleoptera: Scarabaeidae), is an emerging invasive pest in Europe and America. In the Azores, this pest was first found on Terceira Island during the sixties and soon spread to other islands. The rate of infestation differs between islands, and we hypothesized that microbiome composition could play a role. Therefore, we sampled 3rd instar larvae and soil from sites with high and low infestation rates to analyze the microbiome using next-generation sequencing. We analyzed twenty-four 16S DNA libraries, which resulted in 3278 operational taxonomic units. The alpha and beta diversity of the soil microbiome was similar between sites. In contrast, the larvae from high-density sites presented a higher bacterial gut diversity than larvae from low-density sites, with biomarkers linked to plant digestion, nutrient acquisition, and detoxification. Consequently, larvae from high-density sites displayed several enriched molecular functions associated with the families Ruminococcaceae, Clostridiaceae and Rikenellaceae. These bacteria revealed a supportive function by producing several CAZyme families and other proteins. These findings suggest that the microbiome must be one drive for the increase in P. japonica populations, thus providing a checkpoint in the establishment and spread of this pest.

Verified
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DTDuarte Toubarro
Duarte Toubarro
ZTZuzanna Tomkielska
Zuzanna Tomkielska
LSLiliana Silva
Liliana Silva
MBMargarida Borges
Margarida Borges
Nelson José de Oiliveira SimõesNelson José de Oiliveira Simões
Nelson José de Oiliveira Simões
In this work, we studied the effects of various chemicals on P. physalis nematocyst discharge and the composition of the released venom. The exposure of nematocyst to K+ and Na+ induced a massive discharge in a short time of exposure. Conversely, the Ca2+ ions apparently resulted in an inhibitory effect. The electric stimulation was shown to be a reproducible and effective way to induce nematocyst discharge in a few seconds. The SDS-PAGE profile of the venom proteins released revealed a similar pattern, having a broad MW distribution and wide bands with 40, 25 and 20 kDa. The released venom exhibited proteolytic activities that are inhibited by PMSF and EDTA. The present study provides an overview of discharge sensation and venom released of P. physalis nematocysts and could contribute for future venom proteomics research efforts.