Polycyclic Aromatic Hydrocarbons (PAHs) are complex and widely distributed environmental pollutants that can affect living ecosystems. This study was conducted to rapidly degrade phenanthrene and pyrene representing low and high molecular weight of PAHs, respectively. Cronobacter sakazakii MM045 (KT933253) was identified from used engine oil of contaminated soil. PAHs biodegradation was carried out using 2,6-dichlorophenol indophenol (DCPIP) assay. Biodegradation influencing factors including agitation, temperature, pH, inoculums volume and salinity were enhanced using Response Surface Methodology (RSM) by Central Composite Design (CCD). Phenanthrene and pyrene biodegrading metabolites were identified using gas chromatography mass spectrophotometer (GCMS). •Initial biodegradation indicated 75.2% and 54.3% phenanthrene and pyrene degraded by C. sakazakii MM045 within 24 h. After CCD optimisation, 100% degradation was achieved for each of the phenanthrene and pyrene, resulting in the formation of intermediate metabolites.•The identified phenanthrene metabolites were 3,4-dihydroxyphenathrene, phthalic acid, pyruvic acid, acetic acid and oxalic acid. Pyrene intermediates comprised pyrene cis-4,5-dihydrodiol, 3,4-dihydroxyphenanthrene, phthalic acid, pyruvic acid, acetic acid and lactic acid.•Cronbacter sakazakii MM045 was proven to be rapid and effective in degrading PAHs within 24 h despite the unavailability of existing literatures on PAHs biodegradation.

Monitoring the impact of anthropogenic and naturogenic threats on orchid community through diversity, taxonomy and conservation studies is necessary. Reintroduction of these species to their natural habitat associates with their resilience, selection of suitable trees and sites for regeneration and restoration efforts, drives the conservation initiative. Upon obtaining an accurate estimate of the diversity for genetic resource conservation, integrative methods of classical morphological taxonomy, anatomy (micromorphology), and molecular genetics are crucial to solve the taxonomic uncertainty. Changes in microclimatic conditions and habitat structures are the key determinants of both epiphytic and terrestrial orchids assemblages following disturbance. Any assessments of biodiversity and ecosystem service must include variable forest types and management regimes to provide impartial views on the effect of forest and ecological disturbance on the orchid community. Accordingly, a plant-microbial ecology study should be included to study the extent of human-induced climatic variability towards the orchid diversification.

The present study investigated the antioxidant enzyme activities (AEA) of ascorbate peroxidase (APX), catalase (CAT), guaiacol peroxidase (GPX), and superoxide dismutase (SOD) as biomarkers of Cu and Pb stress by using Centella asiatica grown in an experimental hydroponic condition. The results showed (i) higher accumulations of Cu and Pb in the roots of C. asiatica than those in the leaves, (ii) synergistic effects of Cu and Pb stress at higher metal-level exposures, and (iii) Cu and Pb stress triggered the increment of APX, CAT, GPX, and SOD levels in both the leaves and roots of C. asiatica. The increment of four AEA indicated that C. asiatica underwent oxidative stress caused by the production of reactive oxygen species when the plant was exposed to Cu and Pb. In order to prevent damages caused by Cu and Pb stress, the AEA system was heightened in C. asiatica, in which APX, CAT, GPX, and SOD can be used as biomarkers of Pb and Cu stress in the plant.

As an attempt to examine the causes of forest disturbance and degradation of the orchid community, a comparative study on diversity and ecology in eight undisturbed and ten disturbed forests in Peninsular Malaysia was conducted that varied in areas, elevations, vegetation types, and disturbance regimes. Density and individual-based rarefaction curves were used to describe the abundance. Univariate and multivariate analyses were also performed to explore the associations of species abundance with biotic and abiotic factors. The study reported 239 orchid species belonging to 65 genera. Species richness, abundance, density, and diversity of orchids varied by locality. Higher density of orchids (2.433 plants/km²) occurred in the undisturbed forests than in the disturbed forests (0.228 plants/km²). As with the character of undisturbed forests, the temperature was between 27.8 ± 0.3 °C and 31.2 ± 0.2 °C, humid (77.1 ± 1.2%–89.6 ± 0.9%), and with low light intensity (23.8 ± 3.3 μmol m⁻²s⁻¹–171.7 ± 18.8 μmol m⁻²s⁻¹), thus supporting the high density of the plants. Disturbed forests had higher diversity (H = 4.934 and 1-D = 0.990) and abundance (183 species of 57 genera) but were determined to be highly influenced by the higher abundance of epiphytic orchids on the fallen trees and ease of accessibility in the logged forests. Terrestrial and mycoheterotroph orchids were much lower in density and abundance in the disturbed habitat indicating a gradual reduction in their niche availability following the disturbance. Additionally, the ecology data show that the microclimate conditions of the canopy-covered forest was influenced by proximity to the logged area which had eventually reduced the orchids’ habitat quality. Furthermore, the results show that the abundance of epiphytic orchid communities was associated with the host plant characteristics. Host types and bark texture preference were apparent for the epiphytic orchid species, with certain types and textures hosting more orchid species than others. Overall results show that extreme temperature, humidity, and light intensity caused by the canopy opening inflicted damages to the habitat conditions and bark textures of the host plants and limits recolonisation of the orchids in the disturbed forests. The species diversity and density patterns of orchids in undisturbed and disturbed forests revealed in this study provide a baseline for conservationists, policy makers, and forest authorities in expanding the understanding of the forest ecology and vegetation along the disturbance gradient, forest regeneration, and criteria for plant selection for forest restoration in Peninsular Malaysia.

Microbial-induced calcite precipitation (MICP) is a natural process that offered various applications in the engineering field materials and construction industry. It has recently emerged as an innovative, eco-friendly, and economically engineeredprocess. One of the successful MICP methods of improving the engineering properties of soils is ureolysis. The ureolysis drove the process of precipitate calcite which binds soil particles within the soil matrix thus enhance soil characteristicssuch as stiffness, permeability, hydraulic conductivity, shear strength, and compressive strength. This paper aimed at reviewing the concept of utilizing calcium carbonate (CaCO3) precipitation by ureolytic bacteria towards the improvement of soil and sand engineering properties for various geotechnical applications. The potential applications of this technologyin soil erosion, stability, and reinforcement were discussed. Detail overviews of the temperature, pH, bacteria cell concentration, nutrients, types of bacteria, and concentration of reactants that affect the efficiency of the process are also reviewed. This review demonstrated the potential of the MICP technology from the laboratory to a field-scale or commercial applications.