Yongping Huang

Dr. Yongping Huang

Institute of Plant Physiology and Ecology, Shanghai Institute for Biological Sciences Chinese Academy of Sciences, Shanghai, China

Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 October 2013 in Cell Research
Verified
Journal Article
Closed access
YWYueqiang Wang
Yueqiang Wang
ZLZhiqian Li
Zhiqian Li
JXJun Xu
Jun Xu
BZBaosheng Zeng
Baosheng Zeng
LLLin Ling
Lin Ling
ATAnjiang Tan
Anjiang Tan

25 November 2019 in Cell Research
Verified
Journal Article
Closed access
PDF file
SZShuai Zhan
Shuai Zhan
GFGangqi Fang
Gangqi Fang
MCMinmin Cai
Minmin Cai
ZKZongqing Kou
Zongqing Kou
JXJun Xu
Jun Xu
Yongping HuangYongping Huang
Yongping Huang

8 April 2013 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Open access
PDF file
ATAnjiang Tan
Anjiang Tan
GFGuoliang Fu
Guoliang Fu
LJLi Jin
Li Jin
QGQiuhong Guo
Qiuhong Guo
ZLZhiqian Li
Zhiqian Li
Yongping HuangYongping Huang
Yongping Huang
Transgene-based genetic sexing methods are being developed for insects of agricultural and public health importance. Male-only rearing has long been sought in sericulture because males show superior economic characteristics, such as better fitness, lower food consumption, and higher silk yield. Here we report the establishment of a transgene-based genetic sexing system for the silkworm, Bombyx mori . We developed a construct in which a positive feedback loop regulated by sex-specific alternative splicing leads to high-level expression of the tetracycline-repressible transactivator in females only. Transgenic animals show female-specific lethality during embryonic and early larval stages, leading to male-only cocoons. This transgene-based female-specific lethal system not only has wide application in sericulture, but also has great potential in lepidopteran pest control.

10 December 2018 in Nature Ecology & Evolution
Verified
Journal Article
Open access
NWNingning Wu
Ningning Wu
Sufang ZhangSufang Zhang
Sufang Zhang
XLXiaowei Li
Xiaowei Li
YCYanghui Cao
Yanghui Cao
XLXiaojing Liu
Xiaojing Liu
SZShuai Zhan
Shuai Zhan
Invasive species cause considerable ecological and economic damage. Despite decades of broad impacts of invasives on diversity and agriculture, the genetic adaptations and near-term evolution of invading populations are poorly understood. The fall webworm,Hyphantria cunea, a highly successful invasive species that originated in North America, spread throughout the Northern Hemisphere during the past 80 years. Here, we use whole-genome sequencing of invasive populations and transcriptome profiling to probe the underlying genetic bases for the rapid adaptation of this species to new environments and host plants. We find substantial reductions in genomic diversity consistent with founder effects. Genes and pathways associated with carbohydrate metabolism and gustatory receptors are substantially expanded in the webworm genome and show strong signatures of functional polymorphisms in the invasive population. We also find that silk-yielding-associated genes maintained a relatively low level of functional diversity, and identify candidate genes that may regulate the development of silk glands in fall webworms. These data suggest that the fall webworm’s ability to colonize novel hosts, mediated by plasticity in their gustatory capabilities along with an increased ability to utilize novel nutrition sources and substrates, has facilitated the rapid and successful adaptation of the species throughout its range.

1 August 2016 in Insect Biochemistry and Molecular Biology
Verified
Journal Article
Open access
YHYuping Huang
Yuping Huang
YCYazhou Chen
Yazhou Chen
BZBaosheng Zeng
Baosheng Zeng
YWYajun Wang
Yajun Wang
AJAnthony James
Anthony James
MYMin-sheng You
Min-sheng You
The diamondback moth, Plutella xylostella (L.), is a worldwide agricultural pest that has developed resistance to multiple classes of insecticides. Genetics-based approaches show promise as alternative pest management approaches but require functional studies to identify suitable gene targets. Here we use the CRISPR/Cas9 system to target a gene, abdominal-A, which has an important role in determining the identity and functionality of abdominal segments. We report that P. xylostella abdominal-A (Pxabd-A) has two structurally-similar splice isoforms (A and B) that differ only in the length of exon II, with 15 additional nucleotides in isoform A. Pxabd-A transcripts were detected in all developmental stages, and particularly in pupae and adults. CRISPR/Cas9-based mutagenesis of Pxabd-A exon I produced 91% chimeric mutants following injection of 448 eggs. Phenotypes with abnormal prolegs and malformed segments were visible in hatched larvae and unhatched embryos, and various defects were inherited by the next generation (G1). Genotyping of mutants demonstrated several mutations at the Pxabd-A genomic locus. The results indicate that a series of insertions and deletions were induced in the Pxabd-A locus, not only in G0 survivors but also in G1 individuals, and this provides a foundation for genome editing. Our study demonstrates the utility of the CRISPR/Cas9 system for targeting genes in an agricultural pest and therefore provides a foundation the development of novel pest management tools.

16 August 2018 in The ISME Journal
Verified
Journal Article
Open access
PDF file
NLNing Liu
Ning Liu
HLHongjie Li
Hongjie Li
MCMarc Chevrette
Marc Chevrette
LZLei Zhang
Lei Zhang
LCLin Cao
Lin Cao
QWQian Wang
Qian Wang
Plant cell-wall polysaccharides constitute the most abundant but recalcitrant organic carbon source in nature. Microbes residing in the digestive tract of herbivorous bilaterians are particularly efficient at depolymerizing polysaccharides into fermentable sugars and play a significant support role towards their host’s lifestyle. Here, we combine large-scale functional screening of fosmid libraries, shotgun sequencing, and biochemical assays to interrogate the gut microbiota of the wood-feeding “higher” termite Globitermes brachycerastes. A number of putative polysaccharide utilization gene clusters were identified with multiple fibrolytic genes. Our large-scale functional screening of 50,000 fosmid clones resulted in 464 clones demonstrating plant polysaccharide-degrading activities, including 267 endoglucanase-, 24 exoglucanase-, 72 β-glucosidase-, and 101 endoxylanase-positive clones. We sequenced 173 functionally active clones and identified ~219 genes encoding putative carbohydrate-active enzymes (CAZymes) targeting cellulose, hemicellulose and pectin. Further analyses revealed that 68 of 154 contigs encode one or more CAZyme, which includes 35 examples of putative saccharolytic operons, suggesting that clustering of CAZymes is common in termite gut microbial inhabitants. Biochemical characterization of a representative xylanase cluster demonstrated that constituent enzymes exhibited complementary physicochemical properties and saccharolytic capabilities. Furthermore, diverse cellobiose-metabolizing enzymes include β-glucosidases, cellobiose phosphorylases, and phopho-6-β-glucosidases were identified and functionally verified, indicating that the termite gut micro-ecosystem utilizes diverse metabolic pathways to interconnect hydrolysis and central metabolism. Collectively, these results provide an in-depth view of the adaptation and digestive strategies employed by gut microbiota within this tiny-yet-efficient host-associated ecosystem.