Dhanu Gupta

Dr. Dhanu Gupta


Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 November 2021 in Advanced Drug Delivery Reviews
Verified
Journal Article
Open access
DGDhanu Gupta
Dhanu Gupta
AZAntje Maria Zickler
Antje Maria Zickler
SASamir El Andaloussi
Samir El Andaloussi
Extracellular vesicles (EVs) are natural nanoparticles containing biologically active molecules. They are important mediators of intercellular communication and can be exploited therapeutically by various bioengineering approaches. To accurately determine the therapeutic potential of EVs in pre-clinical and clinical settings, dependable dosing strategies are of utmost importance. However, the field suffers from inconsistencies comprising all areas of EV production and characterisation. Therefore, a standardised and well-defined process in EV quantification, key to reliable therapeutic EV dosing, remains to be established. Here, we examined 64 pre-clinical studies for EV-based therapeutics with respect to their applied EV dosing strategies. We identified variations in effective dosing strategies irrespective of the applied EV purification method and cell source. Moreover, we found dose discrepancies depending on the disease model, where EV doses were selected without accounting for published EV pharmacokinetics or biodistribution patterns. We therefore propose to focus on qualitative aspects when dosing EV-based therapeutics, such as the potency of the therapeutic cargo entity. This will ensure batch-to-batch reliability and enhance reproducibility between applications. Furthermore, it will allow for the successful benchmarking of EV-based therapeutics compared to other nanoparticle drug delivery systems, such as viral vector-based or lipid-based nanoparticle approaches.

21 August 2020 in Journal of Extracellular Vesicles
Verified
Journal Article
Open access
DGDhanu Gupta
Dhanu Gupta
XLXiuming Liang
Xiuming Liang
SPSvetlana Pavlova
Svetlana Pavlova
OWOscar P.B. Wiklander
Oscar P.B. Wiklander
GCGiulia Corso
Giulia Corso
OGOskar Gustafsson
Oskar Gustafsson
Extracellular vesicles (EVs) are naturally occurring nano-sized carriers that are secreted by cells and facilitate cell-to-cell communication by their unique ability to transfer biologically active cargo. Despite the pronounced increase in our understanding of EVs over the last decade, from disease pathophysiology to therapeutic drug delivery, improved molecular tools to track their therapeutic delivery are still needed. Unfortunately, the present catalogue of tools utilised for EV labelling lacks sensitivity or are not sufficiently specific. Here, we have explored the bioluminescent labelling of EVs using different luciferase enzymes tethered to CD63 to achieve a highly sensitive system for in vitro and in vivo tracking of EVs. Using tetraspanin fusions to either NanoLuc or ThermoLuc permits performing highly sensitive in vivo quantification of EVs or real-time imaging, respectively, at low cost and in a semi-high throughput manner. We find that the in vivo distribution pattern of EVs is determined by the route of injection, but that different EV subpopulations display differences in biodistribution patterns. By applying this technology for real-time non-invasive in vivo imaging of EVs, we show that their distribution to different internal organs occurs just minutes after administration. Graphical abstract

28 February 2020 in Nature Communications
Verified
Journal Article
Open access
PDF file
OJOlivier De Jong
Olivier De Jong
DMDaniel E. Murphy
Daniel E. Murphy
IMImre Mäger
Imre Mäger
EWEduard Willms
Eduard Willms
AGAntonio Garcia-Guerra
Antonio Garcia-Guerra
PVPieter Vader
Pieter Vader
Extracellular vesicles (EVs) form an endogenous transport system for intercellular transfer of biological cargo, including RNA, that plays a pivotal role in physiological and pathological processes. Unfortunately, whereas biological effects of EV-mediated RNA transfer are abundantly studied, regulatory pathways and mechanisms remain poorly defined due to a lack of suitable readout systems. Here, we describe a highly-sensitive CRISPR-Cas9-based reporter system that allows direct functional study of EV-mediated transfer of small non-coding RNA molecules at single-cell resolution. Using this CRISPR operated stoplight system for functional intercellular RNA exchange (CROSS-FIRE) we uncover various genes involved in EV subtype biogenesis that play a regulatory role in RNA transfer. Moreover we identify multiple genes involved in endocytosis and intracellular membrane trafficking that strongly regulate EV-mediated functional RNA delivery. Altogether, this approach allows the elucidation of regulatory mechanisms in EV-mediated RNA transfer at the level of EV biogenesis, endocytosis, intracellular trafficking, and RNA delivery.

29 April 2025 in Nature Communications
Verified
Journal Article
Open access
PDF file
XLXiuming Liang
Xiuming Liang
DGDhanu Gupta
Dhanu Gupta
JXJunhua Xie
Junhua Xie
EWElien Van Wonterghem
Elien Van Wonterghem
LHLien Van Hoecke
Lien Van Hoecke
OGOskar Gustafsson
Oskar Gustafsson
Intracellular delivery of protein and RNA therapeutics represents a major challenge. Here, we develop highly potent engineered extracellular vesicles (EVs) by incorporating bio-inspired attributes required for effective delivery. These comprise an engineered mini-intein protein with self-cleavage activity for active cargo loading and release, and fusogenic VSV-G protein for endosomal escape. Combining these components allows high efficiency recombination and genome editing in vitro following EV-mediated delivery of Cre recombinase and Cas9/sgRNA RNP cargoes, respectively. In vivo, infusion of a single dose Cre loaded EVs into the lateral ventricle in brain of Cre-LoxP R26-LSL-tdTomato reporter mice results in greater than 40% and 30% recombined cells in hippocampus and cortex respectively. In addition, we demonstrate therapeutic potential of this platform by showing inhibition of LPS-induced systemic inflammation via delivery of a super-repressor of NF-ĸB activity. Our data establish these engineered EVs as a platform for effective delivery of multimodal therapeutic cargoes, including for efficient genome editing.

1 September 2021 in Nature Biomedical Engineering
Verified
Journal Article
Closed access
PDF file
DGDhanu Gupta
Dhanu Gupta
OWOscar P.B. Wiklander
Oscar P.B. Wiklander
André GörgensAndré Görgens
André Görgens
MCMariana Conceição
Mariana Conceição
GCGiulia Corso
Giulia Corso
OGOskar Gustafsson
Oskar Gustafsson

7 August 2023 in Nature Communications
Verified
Journal Article
Open access
PDF file
WZWenyi Zheng
Wenyi Zheng
JRJulia Rädler
Julia Rädler
HSHelena Sork
Helena Sork
ZNZheyu Niu
Zheyu Niu
SRSamantha Roudi
Samantha Roudi
OGOskar Gustafsson
Oskar Gustafsson
Extracellular vesicles (EVs) are gaining ground as next-generation drug delivery modalities. Genetic fusion of the protein of interest to a scaffold protein with high EV-sorting ability represents a robust cargo loading strategy. To address the paucity of such scaffold proteins, we leverage a simple and reliable assay that can distinguish intravesicular cargo proteins from surface- as well as non-vesicular proteins and compare the EV-sorting potential of 244 candidate proteins. We identify 24 proteins with conserved EV-sorting abilities across five types of producer cells. TSPAN2 and TSPAN3 emerge as lead candidates and outperform the well-studied CD63 scaffold. Importantly, these engineered EVs show promise as delivery vehicles in cell cultures and mice as demonstrated by efficient transfer of luminal cargo proteins as well as surface display of different functional entities. The discovery of these scaffolds provides a platform for EV-based engineering.