Helaine Carrer

Dr. Helaine Carrer

orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 February 2016 in Plant Biotechnology Journal
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DRDaniel Alves Ramiro
Daniel Alves Ramiro
DMDanila Montewka Melotto‐Passarin
Danila Montewka Melotto‐Passarin
MBMariana de Almeida Barbosa
Mariana de Almeida Barbosa
FSFlavio dos Santos
Flavio dos Santos
SGSergio Gregorio Perez Gomez
Sergio Gregorio Perez Gomez
HCHelaine Carrer
Helaine Carrer
Summary: The sustainability of global crop production is critically dependent on improving tolerance of crop plants to various types of environmental stress. Thus, identification of genes that confer stress tolerance in crops has become a top priority especially in view of expected changes in global climatic patterns. Drought stress is one of the abiotic stresses that can result in dramatic loss of crop productivity. In this work, we show that transgenic expression of a highly conserved cell death suppressor,Bax Inhibitor‐1fromArabidopsis thaliana(AtBI‐1), can confer increased tolerance of sugarcane plants to long‐term (>20 days) water stress conditions. This robust trait is correlated with an increased tolerance of the transgenic sugarcane plants, especially in the roots, to induction of endoplasmic reticulum (ER) stress by the protein glycosylation inhibitor tunicamycin. Our findings suggest that suppression ofERstress in C4grasses, which include important crops such as sorghum and maize, can be an effective means of conferring improved tolerance to long‐term water deficit. This result could potentially lead to improved resilience and yield of major crops in the world.

22 July 2014 in BMC Research Notes
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EGEsteban Galeano
Esteban Galeano
TVTarcísio Sales Vasconcelos
Tarcísio Sales Vasconcelos
DRDaniel Alves Ramiro
Daniel Alves Ramiro
VMValentina de Fátima De Martin
Valentina de Fátima De Martin
HCHelaine Carrer
Helaine Carrer
Teak (Tectona grandis L.f.) is currently the preferred choice of the timber trade for fabrication of woody products due to its extraordinary qualities and is widely grown around the world. Gene expression studies are essential to explore wood formation of vascular plants, and quantitative real-time reverse transcription PCR (qRT-PCR) is a sensitive technique employed for quantifying gene expression levels. One or more appropriate reference genes are crucial to accurately compare mRNA transcripts through different tissues/organs and experimental conditions. Despite being the focus of some genetic studies, a lack of molecular information has hindered genetic exploration of teak. To date, qRT-PCR reference genes have not been identified and validated for teak.

15 September 2015 in BMC Plant Biology
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EGEsteban Galeano
Esteban Galeano
TVTarcísio Sales Vasconcelos
Tarcísio Sales Vasconcelos
MVMabel Vidal
Mabel Vidal
MMMaria Katherine Mejia-Guerra
Maria Katherine Mejia-Guerra
HCHelaine Carrer
Helaine Carrer
Currently, Tectona grandis is one of the most valuable trees in the world and no transcript dataset related to secondary xylem is available. Considering how important the secondary xylem and sapwood transition from young to mature trees is, little is known about the expression differences between those successional processes and which transcription factors could regulate lignin biosynthesis in this tropical tree. Although MYB transcription factors are one of the largest superfamilies in plants related to secondary metabolism, it has not yet been characterized in teak. These results will open new perspectives for studies of diversity, ecology, breeding and genomic programs aiming to understand deeply the biology of this species. We present a widely expressed gene catalog for T. grandis using Illumina technology and the de novo assembly. A total of 462,260 transcripts were obtained, with 1,502 and 931 genes differentially expressed for stem and branch secondary xylem, respectively, during age transition. Analysis of stem and branch secondary xylem indicates substantial similarity in gene ontologies including carbohydrate enzymes, response to stress, protein binding, and allowed us to find transcription factors and heat-shock proteins differentially expressed. TgMYB1 displays a MYB domain and a predicted coiled-coil (CC) domain, while TgMYB2, TgMYB3 and TgMYB4 showed R2R3-MYB domain and grouped with MYBs from several gymnosperms and flowering plants. TgMYB1, TgMYB4 and TgCES presented higher expression in mature secondary xylem, in contrast with TgMYB2, TgHsp1, TgHsp2, TgHsp3, and TgBi whose expression is higher in young lignified tissues. TgMYB3 is expressed at lower level in secondary xylem. Expression patterns of MYB transcription factors and heat-shock proteins in lignified tissues are dissimilar when tree development was evaluated, obtaining more expression of TgMYB1 and TgMYB4 in lignified tissues of 60-year-old trees, and more expression in TgHsp1, TgHsp2, TgHsp3 and TgBi in stem secondary xylem of 12-year-old trees. We are opening a door for further functional characterization by reverse genetics and marker-assisted selection with those genes. Investigation of some of the key regulators of lignin biosynthesis in teak, however, could be a valuable step towards understanding how rigidity of teak wood and extractives content are different from most other woods. The obtained transcriptome data represents new sequences of T. grandis deposited in public databases, representing an unprecedented opportunity to discover several related-genes associated with secondary xylem such as transcription factors and stress-related genes in a tropical tree.

5 May 2023 in Plants
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HGHumberto Gajardo
Humberto Gajardo
OGOlman Gómez-Espinoza
Olman Gómez-Espinoza
Pedro Boscariol FerreiraPedro Boscariol Ferreira
Pedro Boscariol Ferreira
HCHelaine Carrer
Helaine Carrer
León Aloys BravoLeón Aloys Bravo
León Aloys Bravo
Worldwide food security is under threat in the actual scenery of global climate change because the major staple food crops are not adapted to hostile climatic and soil conditions. Significant efforts have been performed to maintain the actual yield of crops, using traditional breeding and innovative molecular techniques to assist them. However, additional strategies are necessary to achieve the future food demand. Clustered regularly interspaced short palindromic repeat/CRISPR-associated protein (CRISPR/Cas) technology, as well as its variants, have emerged as alternatives to transgenic plant breeding. This novelty has helped to accelerate the necessary modifications in major crops to confront the impact of abiotic stress on agriculture systems. This review summarizes the current advances in CRISPR/Cas applications in crops to deal with the main hostile soil conditions, such as drought, flooding and waterlogging, salinity, heavy metals, and nutrient deficiencies. In addition, the potential of extremophytes as a reservoir of new molecular mechanisms for abiotic stress tolerance, as well as their orthologue identification and edition in crops, is shown. Moreover, the future challenges and prospects related to CRISPR/Cas technology issues, legal regulations, and customer acceptance will be discussed.

17 July 2013 in World Journal of Microbiology and Biotechnology
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DLDaniel R. Lammel
Daniel R. Lammel
LCLeonardo Cruz
Leonardo Cruz
HCHelaine Carrer
Helaine Carrer
ECElke Jurandy Bran Nogueira Cardoso
Elke Jurandy Bran Nogueira Cardoso

23 December 2019 in Genes
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Journal Article
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FMFernando Matias
Fernando Matias
MPMaisa De Siqueira Pinto
Maisa De Siqueira Pinto
POPerla Novais de Oliveira
Perla Novais de Oliveira
Diego Mauricio RIANO PACHONDiego Mauricio RIANO PACHON
Diego Mauricio RIANO PACHON
LILaura Beatriz Inocente
Laura Beatriz Inocente
HCHelaine Carrer
Helaine Carrer
NAC proteins are one of the largest families of plant-specific transcription factors (TFs). They regulate diverse complex biological processes, including secondary xylem differentiation and wood formation. Recent genomic and transcriptomic studies of Tectona grandis L.f. (teak), one of the most valuable hardwood trees in the world, have allowed identification and analysis of developmental genes. In the present work, T. grandis NAC genes were identified and analyzed regarding to their evolution and expression profile during wood formation. We analyzed the recently published T. grandis genome, and identified 130 NAC proteins that are coded by 107 gene loci. These proteins were classified into 23 clades of the NAC family, together with Populus, Eucalyptus, and Arabidopsis. Data on transcript expression revealed specific temporal and spatial expression patterns for the majority of teak NAC genes. RT-PCR indicated expression of VND genes (Tg11g04450-VND2 and Tg15g08390-VND4) related to secondary cell wall formation in xylem vessels of 16-year-old juvenile trees. Our findings open a way to further understanding of NAC transcription factor genes in T. grandis wood biosynthesis, while they are potentially useful for future studies aiming to improve biomass and wood quality using biotechnological approaches.