Ahmed N. Al-Sabi

Dr. Ahmed N. Al-Sabi

Abdullah Al Salem University, Kuwait City, Al ‘Āşimah, Kuwait
orcid
Associate Professor in Neuroscience

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 January 2014 in Journal of General Physiology
Verified
Journal Article
Open access
RFRocio Finol-Urdaneta
Rocio Finol-Urdaneta
YWYibo Wang
Yibo Wang
Ahmed N. Al-SabiAhmed N. Al-Sabi
Ahmed N. Al-Sabi
CZChunfeng Zhao
Chunfeng Zhao
SNSergei Noskov
Sergei Noskov
RFRobert J. French
Robert J. French
Striking structural differences between voltage-gated sodium (Nav) channels from prokaryotes (homotetramers) and eukaryotes (asymmetric, four-domain proteins) suggest the likelihood of different molecular mechanisms for common functions. For these two channel families, our data show similar selectivity sequences among alkali cations (relative permeability, Pion/PNa) and asymmetric, bi-ionic reversal potentials when the Na/K gradient is reversed. We performed coordinated experimental and computational studies, respectively, on the prokaryotic Nav channels NaChBac and NavAb. NaChBac shows an “anomalous,” nonmonotonic mole-fraction dependence in the presence of certain sodium–potassium mixtures; to our knowledge, no comparable observation has been reported for eukaryotic Nav channels. NaChBac’s preferential selectivity for sodium is reduced either by partial titration of its highly charged selectivity filter, when extracellular pH is lowered from 7.4 to 5.8, or by perturbation—likely steric—associated with a nominally electro-neutral substitution in the selectivity filter (E191D). Although no single molecular feature or energetic parameter appears to dominate, our atomistic simulations, based on the published NavAb crystal structure, revealed factors that may contribute to the normally observed selectivity for Na over K. These include: (a) a thermodynamic penalty to exchange one K+ for one Na+ in the wild-type (WT) channel, increasing the relative likelihood of Na+ occupying the binding site; (b) a small tendency toward weaker ion binding to the selectivity filter in Na–K mixtures, consistent with the higher conductance observed with both sodium and potassium present; and (c) integrated 1-D potentials of mean force for sodium or potassium movement that show less separation for the less selective E/D mutant than for WT. Overall, tight binding of a single favored ion to the selectivity filter, together with crucial inter-ion interactions within the pore, suggests that prokaryotic Nav channels use a selective strategy more akin to those of eukaryotic calcium and potassium channels than that of eukaryotic Nav channels.

9 February 2022 in Life
Verified
Journal Article
Open access
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RRrabih roufayel
rabih roufayel
Khaled YounesKhaled Younes
Khaled Younes
Ahmed N. Al-SabiAhmed N. Al-Sabi
Ahmed N. Al-Sabi
Nimer MurshidNimer Murshid
Nimer Murshid
Apoptosis is an evolutionarily conserved and tightly regulated cell death pathway. Physiological cell death is important for maintaining homeostasis and optimal biological conditions by continuous elimination of undesired or superfluous cells. The BH3-only pro-apoptotic members are strong inducers of apoptosis. The pro-apoptotic BH3-only protein Noxa activates multiple death pathways by inhibiting the anti-apoptotic Bcl-2 family protein, Mcl-1, and other protein members leading to Bax and Bak activation and MOMP. On the other hand, Puma is induced by p53-dependent and p53-independent apoptotic stimuli in several cancer cell lines. Moreover, this protein is involved in several physiological and pathological processes, such as immunity, cancer, and neurodegenerative diseases. Future heat shock research could disclose the effect of hyperthermia on both Noxa and BH3-only proteins. This suggests post-transcriptional mechanisms controlling the translation of both Puma and Noxa mRNA in heat-shocked cells. This study was also the chance to recapitulate the different reactional mechanisms investigated for caspases.

3 November 2020 in Signal Transduction and Targeted Therapy
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Journal Article
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Tarek Abd El-AzizTarek Abd El-Aziz
Tarek Abd El-Aziz
Ahmed N. Al-SabiAhmed N. Al-Sabi
Ahmed N. Al-Sabi
JSJames D. Stockand
James D. Stockand

3 February 2014 in PLOS ONE
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Journal Article
Open access
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BBBandita Bagchi
Bandita Bagchi
Ahmed N. Al-SabiAhmed N. Al-Sabi
Ahmed N. Al-Sabi
SKSeshu Kaza
Seshu Kaza
DSDimitri Scholz
Dimitri Scholz
VOValerie O'Leary
Valerie O'Leary
Saak OvsepianSaak Ovsepian
Saak Ovsepian
The molecular determinants of abnormal propagation of action potentials along axons and ectopic conductance in demyelinating diseases of the central nervous system, like multiple sclerosis (MS), are poorly defined. Widespread interruption of myelin occurs in several mouse models of demyelination, rendering them useful for research. Herein, considerable myelin loss is shown in the optic nerves of cuprizone-treated demyelinating mice. Immuno-fluorescence confocal analysis of the expression and distribution of voltage-activated K+ channels (KV1.1 and 1.2 α subunits) revealed their spread from typical juxta-paranodal (JXP) sites to nodes in demyelinated axons, albeit with a disproportionate increase in the level of KV1.1 subunit. Functionally, in contrast to monophasic compound action potentials (CAPs) recorded in controls, responses derived from optic nerves of cuprizone-treated mice displayed initial synchronous waveform followed by a dispersed component. Partial restoration of CAPs by broad spectrum (4-aminopyridine) or KV1.1-subunit selective (dendrotoxin K) blockers of K+ currents suggest enhanced KV1.1-mediated conductance in the demyelinated optic nerve. Biophysical profiling of K+ currents mediated by recombinant channels comprised of different KV1.1 and 1.2 stoichiometries revealed that the enrichment of KV1 channels KV1.1 subunit endows a decrease in the voltage threshold and accelerates the activation kinetics. Together with the morphometric data, these findings provide important clues to a molecular basis for temporal dispersion of CAPs and reduced excitability of demyelinated optic nerves, which could be of potential relevance to the patho-physiology of MS and related disorders.

20 March 2020 in Marine Drugs
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Journal Article
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RFRocio Finol-Urdaneta
Rocio Finol-Urdaneta
ABAleksandra Belovanovic
Aleksandra Belovanovic
MMMilica Micic-Vicovac
Milica Micic-Vicovac
Gemma KinsellaGemma Kinsella
Gemma Kinsella
JMJeffrey McArthur
Jeffrey McArthur
Ahmed N. Al-SabiAhmed N. Al-Sabi
Ahmed N. Al-Sabi
Toxins from marine animals provide molecular tools for the study of many ion channels, including mammalian voltage-gated potassium channels of the Kv1 family. Selectivity profiling and molecular investigation of these toxins have contributed to the development of novel drug leads with therapeutic potential for the treatment of ion channel-related diseases or channelopathies. Here, we review specific peptide and small-molecule marine toxins modulating Kv1 channels and thus cover recent findings of bioactives found in the venoms of marine Gastropod (cone snails), Cnidarian (sea anemones), and small compounds from cyanobacteria. Furthermore, we discuss pivotal advancements at exploiting the interaction of κM-conotoxin RIIIJ and heteromeric Kv1.1/1.2 channels as prevalent neuronal Kv complex. RIIIJ’s exquisite Kv1 subtype selectivity underpins a novel and facile functional classification of large-diameter dorsal root ganglion neurons. The vast potential of marine toxins warrants further collaborative efforts and high-throughput approaches aimed at the discovery and profiling of Kv1-targeted bioactives, which will greatly accelerate the development of a thorough molecular toolbox and much-needed therapeutics.

17 June 2004 in Biochemistry
Verified
Journal Article
Closed access
Ahmed N. Al-SabiAhmed N. Al-Sabi
Ahmed N. Al-Sabi
DLDirk Lennartz
Dirk Lennartz
MFMichael Ferber
Michael Ferber
JGJozsef Gulyas
Jozsef Gulyas
JRJean E. F. Rivier
Jean E. F. Rivier
HTHeinrich Terlau
Heinrich Terlau