Lucie Zimova

Dr. Lucie Zimova

orcid

Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 December 2019 in Cells
Verified
Journal Article
Open access
PDF file
VSViktor Sinica
Viktor Sinica
LZLucie Zimova
Lucie Zimova
KBKristyna Barvikova
Kristyna Barvikova
LMLucie Macikova
Lucie Macikova
IBIvan Barvik
Ivan Barvik
VVViktorie Vlachova
Viktorie Vlachova
Transient receptor potential ankyrin 1 channel (TRPA1) serves as a key sensor for reactive electrophilic compounds across all species. Its sensitivity to temperature, however, differs among species, a variability that has been attributed to an evolutionary divergence. Mouse TRPA1 was implicated in noxious cold detection but was later also identified as one of the prime noxious heat sensors. Moreover, human TRPA1, originally considered to be temperature-insensitive, turned out to act as an intrinsic bidirectional thermosensor that is capable of sensing both cold and heat. Using electrophysiology and modeling, we compare the properties of human and mouse TRPA1, and we demonstrate that both orthologues are activated by heat, and their kinetically distinct components of voltage-dependent gating are differentially modulated by heat and cold. Furthermore, we show that both orthologues can be strongly activated by cold after the concurrent application of voltage and heat. We propose an allosteric mechanism that could account for the variability in TRPA1 temperature responsiveness.

5 December 2022 in Nature Communications
Verified
Journal Article
Open access
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LZLiying Zhang
Liying Zhang
CSCharlotte Simonsen
Charlotte Simonsen
LZLucie Zimova
Lucie Zimova
KWKaituo Wang
Kaituo Wang
LMLavanya Moparthi
Lavanya Moparthi
PZPeter M. Zygmunt
Peter M. Zygmunt
TRPV2 is a ligand-operated temperature sensor with poorly defined pharmacology. Here, we combine calcium imaging and patch-clamp electrophysiology with cryo-electron microscopy (cryo-EM) to explore how TRPV2 activity is modulated by the phytocannabinoid Δ9-tetrahydrocannabiorcol (C16) and by probenecid. C16 and probenecid act in concert to stimulate TRPV2 responses including histamine release from rat and human mast cells. Each ligand causes distinct conformational changes in TRPV2 as revealed by cryo-EM. Although the binding for probenecid remains elusive, C16 associates within the vanilloid pocket. As such, the C16 binding location is distinct from that of cannabidiol, partially overlapping with the binding site of the TRPV2 inhibitor piperlongumine. Taken together, we discover a new cannabinoid binding site in TRPV2 that is under the influence of allosteric control by probenecid. This molecular insight into ligand modulation enhances our understanding of TRPV2 in normal and pathophysiology.

23 January 2018 in Science Signaling
Verified
Journal Article
Closed access
PDF file
LZLucie Zimova
Lucie Zimova
VSViktor Sinica
Viktor Sinica
AKAnna Kadkova
Anna Kadkova
LVLenka Vyklicka
Lenka Vyklicka
VZVlastimil Zima
Vlastimil Zima
VVViktorie Vlachova
Viktorie Vlachova
A cavity in the ion channel TRPA1 coordinates electrophilic, voltage, and calcium sensitivity and might be targeted to treat pain and other disorders.

1 June 2015 in Neuropharmacology
Verified
Journal Article
Closed access
VZVlastimil Zíma
Vlastimil Zíma
KWKatja Witschas
Katja Witschas
AHAnna Hynkova
Anna Hynkova
LZLucie Zimova
Lucie Zimova
IBIvan Barvík
Ivan Barvík
VVViktorie Vlachova
Viktorie Vlachova

31 January 2017 in Frontiers in Molecular Neuroscience
Verified
Journal Article
Open access
LMLenka Marsakova
Lenka Marsakova
IBIvan Barvik
Ivan Barvik
VZVlastimil Zima
Vlastimil Zima
LZLucie Zimova
Lucie Zimova
VVViktorie Vlachova
Viktorie Vlachova
Transient receptor potential ankyrin 1 (TRPA1) is an excitatory ion channel involved in pain, inflammation and itching. This channel gates in response to many irritant and proalgesic agents, and can be modulated by calcium and depolarizing voltage. While the closed-state structure of TRPA1 has been recently resolved, also having its open state is essential for understanding how this channel works. Here we use molecular dynamics simulations combined with electrophysiological measurements and systematic mutagenesis to predict and explore the conformational changes coupled to the expansion of the presumptive channel’s lower gate. We show that, upon opening, the upper part of the sensor module approaches the pore domain of an adjacent subunit and the conformational dynamics of the first extracellular flexible loop may govern the voltage-dependence of multimodal gating, thereby serving to stabilize the open state of the channel. These results are generally important in understanding the structure and function of TRPA1 and offer new insights into the gating mechanism of TRPA1 and related channels.

12 March 2020 in Frontiers in Physiology
Verified
Journal Article
Open access
PDF file
LZLucie Zimova
Lucie Zimova
KBKristyna Barvikova
Kristyna Barvikova
LMLucie Macikova
Lucie Macikova
LVLenka Vyklicka
Lenka Vyklicka
VSViktor Sinica
Viktor Sinica
VVViktorie Vlachova
Viktorie Vlachova
Our understanding of the general principles of the polymodal regulation of transient receptor potential (TRP) ion channels has grown impressively in recent years as a result of intense efforts in protein structure determination by cryo-electron microscopy. In particular, the high-resolution structures of various TRP channels captured in different conformations, a number of them determined in a membrane mimetic environment, have yielded valuable insights into their architecture, gating properties and the sites of their interactions with annular and regulatory lipids. The correct repertoire of these channels is, however, organized by supramolecular complexes that involve the localization of signaling proteins to sites of action, ensuring the specificity and speed of signal transduction events. As such, TRP ankyrin 1 (TRPA1), a major player involved in various pain conditions, localizes into cholesterol-rich sensory membrane microdomains, physically interacts with calmodulin, associates with the scaffolding A-kinase anchoring protein (AKAP) and forms functional complexes with the related TRPV1 channel. This perspective will contextualize the recent biochemical and functional studies with emerging structural data with the aim of enabling a more thorough interpretation of the results, which may ultimately help to understand the roles of TRPA1 under various physiological and pathophysiological pain conditions. We demonstrate that an alteration to the putative lipid-binding site containing a residue polymorphism associated with human asthma affects the cold sensitivity of TRPA1. Moreover, we present evidence that TRPA1 can interact with AKAP to prime the channel for opening. The structural bases underlying these interactions remain unclear and are definitely worth the attention of future studies.