Vladimir Bamm

Dr. Vladimir Bamm

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Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 February 2018 in Nature Communications
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Journal Article
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TRTammy Ryan
Tammy Ryan
VBVladimir Bamm
Vladimir Bamm
MSMorgan G. Stykel
Morgan G. Stykel
CCCarla L. Coackley
Carla L. Coackley
KHKayla M. Humphries
Kayla M. Humphries
SRScott D. Ryan
Scott D. Ryan
Neuronal loss in Parkinson’s disease (PD) is associated with aberrant mitochondrial function and impaired proteostasis. Identifying the mechanisms that link these pathologies is critical to furthering our understanding of PD pathogenesis. Using human pluripotent stem cells (hPSCs) that allow comparison of cells expressing mutant SNCA (encoding α-synuclein (α-syn)) with isogenic controls, or SNCA-transgenic mice, we show that SNCA-mutant neurons display fragmented mitochondria and accumulate α-syn deposits that cluster to mitochondrial membranes in response to exposure of cardiolipin on the mitochondrial surface. Whereas exposed cardiolipin specifically binds to and facilitates refolding of α-syn fibrils, prolonged cardiolipin exposure in SNCA-mutants initiates recruitment of LC3 to the mitochondria and mitophagy. Moreover, we find that co-culture of SNCA-mutant neurons with their isogenic controls results in transmission of α-syn pathology coincident with mitochondrial pathology in control neurons. Transmission of pathology is effectively blocked using an anti-α-syn monoclonal antibody (mAb), consistent with cell-to-cell seeding of α-syn.

12 March 2004 in Biochemistry
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Journal Article
Closed access
VBVladimir Bamm
Vladimir Bamm
VTVladimir A. Tsemakhovich
Vladimir A. Tsemakhovich
MSMatityahu Shaklai
Matityahu Shaklai
NSNurith Shaklai
Nurith Shaklai

30 October 2015 in Biochemical Journal
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Journal Article
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KVKenrick A. Vassall
Kenrick A. Vassall
VBVladimir Bamm
Vladimir Bamm
GHGeorge Harauz
George Harauz
The classic isoforms of myelin basic protein (MBP, 14–21.5 kDa) are essential to formation of the multilamellar myelin sheath of the mammalian central nervous system (CNS). The predominant 18.5-kDa isoform links together the cytosolic surfaces of oligodendrocytes, but additionally participates in cytoskeletal turnover and membrane extension, Fyn-mediated signalling pathways, sequestration of phosphoinositides and maintenance of calcium homoeostasis. All MBP isoforms are intrinsically disordered proteins (IDPs) that interact via molecular recognition fragments (MoRFs), which thereby undergo local disorder-to-order transitions. Their conformations and associations are modulated by environment and by a dynamic barcode of post-translational modifications, particularly phosphorylation by mitogen-activated and other protein kinases and deimination [a hallmark of demyelination in multiple sclerosis (MS)]. The MBPs are thus to myelin what basic histones are to chromatin. Originally thought to be merely structural proteins forming an inert spool, histones are now known to be dynamic entities involved in epigenetic regulation and diseases such as cancer. Analogously, the MBPs are not mere adhesives of compact myelin, but active participants in oligodendrocyte proliferation and in membrane process extension and stabilization during myelinogenesis. A central segment of these proteins is pivotal in membrane-anchoring and SH3 domain (Src homology 3) interaction. We discuss in the present review advances in our understanding of conformational conversions of this classic basic protein upon membrane association, including new thermodynamic analyses of transitions into different structural ensembles and how a shift in the pattern of its post-translational modifications is associated with the pathogenesis and potentially onset of demyelination in MS.

20 May 2003 in Biochemistry
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Journal Article
Closed access
NGNatalie Grinshtein
Natalie Grinshtein
VBVladimir Bamm
Vladimir Bamm
VTVladimir Abraham Tsemakhovich
Vladimir Abraham Tsemakhovich
NSNurith Shaklai
Nurith Shaklai

24 April 2018 in The FASEB Journal
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Journal Article
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MSMorgan G. Stykel
Morgan G. Stykel
KHKayla Humphries
Kayla Humphries
MKMathew P. Kirby
Mathew P. Kirby
CCChris Czaniecki
Chris Czaniecki
TWTinya Wang
Tinya Wang
SRScott D. Ryan
Scott D. Ryan
Neuronal loss in Parkinson's disease (PD) is associated with aberrant mitochondrial function in dopaminergic (DA) neurons of the substantia nigra pars compacta. An association has been reported between PD onset and exposure to mitochondrial toxins, including the agrochemicals paraquat (PQ), maneb (MB), and rotenone (Rot). Here, with the use of a patient‐derived stem cell model of PD, allowing comparison of DA neurons harboring a mutation in the α‐synuclein (a‐syn) gene ( SNCA‐A53T ) against isogenic, mutation‐corrected controls, we describe a novel mechanism whereby NO, generated from SNCA‐ A53T mutant neurons exposed to Rot or PQ/MB, inhibits anterograde mitochondrial transport through nitration of α‐tubulin (α‐Tub). Nitration of α‐Tub inhibited the association of both α‐syn and the mitochondrial motor protein kinesin 5B with the microtubules, arresting anterograde transport. This was, in part, a result of nitration of α‐Tub in the C‐terminal domain. These effects were rescued by inhibiting NO synthesis with the NOS inhibitor Nω‐nitro‐L‐arginine methyl ester. Collectively, our results are the first to demonstrate a gene by environment interaction in PD, whereby agrochemical exposure selectively triggers a deficit in mitochondrial transport by nitrating the microtubules in neurons harboring the SNCA‐ A53T mutation.—Stykel, M. G., Humphries, K., Kirby, M. P., Czaniecki, C., Wang, T., Ryan, T., Bamm, V., Ryan, S. D. Nitration of microtubules blocks axonal mitochondrial transport in a human pluripotent stem cell model of Parkinson's disease. FASEB J. 32, 5350–5364 (2018). www.fasebj.org

1 May 2021 in Cell Reports
Verified
Journal Article
Open access
MSMorgan G. Stykel
Morgan G. Stykel
KHKayla M. Humphries
Kayla M. Humphries
EKEvelyn Kamski-Hennekam
Evelyn Kamski-Hennekam
BBBrodie Buchner-Duby
Brodie Buchner-Duby
NPNatalie Porte-Trachsel
Natalie Porte-Trachsel
SRScott D. Ryan
Scott D. Ryan
Neuronal loss in Parkinson's disease (PD) is associated with impaired proteostasis and accumulation of α-syn microaggregates in dopaminergic neurons. These microaggregates promote seeding of α-synuclein (α-syn) pathology between synaptically linked neurons. However, the mechanism by which seeding is initiated is not clear. Using human pluripotent stem cell (hPSC) models of PD that allow comparison of SNCA mutant cells with isogenic controls, we find that SNCA mutant neurons accumulate α-syn deposits that cluster to multiple endomembrane compartments, specifically multivesicular bodies (MVBs) and lysosomes. We demonstrate that A53T and E46K α-syn variants bind and sequester LC3B monomers into detergent-insoluble microaggregates on the surface of late endosomes, increasing α-syn excretion via exosomes and promoting seeding of α-syn from SNCA mutant neurons to wild-type (WT) isogenic controls. Finally, we show that constitutive inactivation of LC3B promotes α-syn accumulation and seeding, while LC3B activation inhibits these events, offering mechanistic insight into the spread of synucleinopathy in PD.