Joanna Makowska

Dr. Joanna Makowska

Faculty of Chemistry, University of Gdańsk, Wita Stwosza 63, 80-308 Gdańsk, Poland
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Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 September 2015 in PLOS ONE
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Magdalena PlotkaMagdalena Plotka
Magdalena Plotka
AKAnna-Karina Kaczorowska
Anna-Karina Kaczorowska
AMAgnieszka Morzywolek
Agnieszka Morzywolek
JMJoanna Makowska
Joanna Makowska
Lukasz Pawel KozlowskiLukasz Pawel Kozlowski
Lukasz Pawel Kozlowski
TKTadeusz Kaczorowski
Tadeusz Kaczorowski
Phage vB_Tsc2631 infects the extremophilic bacterium Thermus scotoductus MAT2631 and uses the Ts2631 endolysin for the release of its progeny. The Ts2631 endolysin is the first endolysin from thermophilic bacteriophage with an experimentally validated catalytic site. In silico analysis and computational modelling of the Ts2631 endolysin structure revealed a conserved Zn2+ binding site (His30, Tyr58, His131 and Cys139) similar to Zn2+ binding site of eukaryotic peptidoglycan recognition proteins (PGRPs). We have shown that the Ts2631 endolysin lytic activity is dependent on divalent metal ions (Zn2+ and Ca2+). The Ts2631 endolysin substitution variants H30N, Y58F, H131N and C139S dramatically lost their antimicrobial activity, providing evidence for the role of the aforementioned residues in the lytic activity of the enzyme. The enzyme has proven to be not only thermoresistant, retaining 64.8% of its initial activity after 2 h at 95°C, but also highly thermodynamically stable (Tm = 99.82°C, ΔHcal = 4.58 × 104 cal mol-1). Substitutions of histidine residues (H30N and H131N) and a cysteine residue (C139S) resulted in variants aggregating at temperatures ≥75°C, indicating a significant role of these residues in enzyme thermostability. The substrate spectrum of the Ts2631 endolysin included extremophiles of the genus Thermus but also Gram-negative mesophiles, such as Escherichia coli, Salmonella panama, Pseudomonas fluorescens and Serratia marcescens. The broad substrate spectrum and high thermostability of this endolysin makes it a good candidate for use as an antimicrobial agent to combat Gram-negative pathogens.


10 February 2019 in Molecules
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DŚDaria Śmigiel-Kamińska
Daria Śmigiel-Kamińska
JPJan Pośpiech
Jan Pośpiech
JMJoanna Makowska
Joanna Makowska
Piotr StepnowskiPiotr Stepnowski
Piotr Stepnowski
Jolanta Was-GubalaJolanta Was-Gubala
Jolanta Was-Gubala
JKJolanta Kumirska
Jolanta Kumirska
In forensic laboratories, the most commonly analyzed microtraces are microscopic fragments of single fibers. One of the main goals of the examination of fragments of fibers a few millimeters long is to determine their characteristic physicochemical properties and compare them with fibers originating from a known source (e.g., a suspect’s clothes). The color and dyes of fiber microtraces play an important role in their research and evaluation, being analyzed by means of microscopic, spectroscopic, and chromatographic methods. The results of examinations conducted with the use of spectroscopic techniques might be ambiguous due to overlapping bands of absorption and the transmission and dispersion of electromagnetic radiation corresponding to the specific chemical structure of the fibers and their dyes. For this reason, it is very important to improve currently available spectroscopic methods and/or to propose new ones that allow evidential materials to be analyzed in a much more reliable way. In this review, the possibility of the use of chromatographic techniques with different detection systems for such analyses is underlined. This review covers the different analytical methods used in the forensic analysis of polyester fibers dyed with disperse dyes. Polyester fibers occupy the first position among synthetic fibers in their use for a variety of purposes, and disperse dyes are commonly applied for dyeing them.

26 March 2015 in Journal of Thermal Analysis and Calorimetry
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JMJoanna Makowska
Joanna Makowska
DWDariusz Wyrzykowski
Dariusz Wyrzykowski
BPBogusław Pilarski
Bogusław Pilarski
LCLech Chmurzyński
Lech Chmurzyński
Three complementary experimental techniques: isothermal titration calorimetry, differential scanning calorimetry and conductometric titration, have successfully been applied to describe the process of sodium dodecyl sulphate (SDS) micellization in the presence of pH buffering substances, namely 2-(N-morpholino)ethanesulfonic acid, piperazine-N,N’-bis(2-ethanesulfonic acid), 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid and 3-(N-morpholino)propanesulfonic acid, commonly used in biological experiments as well as in calorimetric studies. The measurements were taken in aqueous solutions (pH 6.5), at 298.15 K. The influence of the buffer components as well as the composition of the system under study on the critical micelle concentration, the molar standard enthalpy for micelle formation (Δmic H 0) and the molar heat capacity that corresponds to the thermal midpoint (T m) of micelle transition has been discussed. It has been shown that the dependence of SDS stability on the kind of buffer may be helpful for the precise interpretation of the molecular recognition processes.

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JŻJoanna Żebrowska
Joanna Żebrowska
OŻOlga Żołnierkiewicz
Olga Żołnierkiewicz
MPMałgorzata Ponikowska
Małgorzata Ponikowska
MPMichał Puchalski
Michał Puchalski
NKNatalia Krawczun
Natalia Krawczun
PSPiotr Skowron
Piotr Skowron
The obligatory step in the life cycle of a lytic bacteriophage is the release of its progeny particles from infected bacterial cells. The main barrier to overcome is the cell wall, composed of crosslinked peptidoglycan, which counteracts the pressure prevailing in the cytoplasm and protects the cell against osmotic lysis and mechanical damage. Bacteriophages have developed two strategies leading to the release of progeny particles: the inhibition of peptidoglycan synthesis and enzymatic cleavage by a bacteriophage-coded endolysin. In this study, we cloned and investigated the TP84_28 endolysin of the bacteriophage TP-84, which infects thermophilic Geobacillus stearothermophilus, determined the enzymatic characteristics, and initially evaluated the endolysin application as a non-invasive agent for disinfecting surfaces, including those exposed to high temperatures. Both the native and recombinant TP84_28 endolysins, obtained through the Escherichia coli T7-lac expression system, are highly thermostable and retain trace activity after incubation at 100 °C for 30 min. The proteins exhibit strong bacterial wall digestion activity up to 77.6 °C, decreasing to marginal activity at ambient temperatures. We assayed the lysis of various types of bacteria using TP84_28 endolysins: Gram-positive, Gram-negative, encapsulated, and pathogenic. Significant lytic activity was observed on the thermophilic and mesophilic Gram-positive bacteria and, to a lesser extent, on the thermophilic and mesophilic Gram-negative bacteria. The thermostable TP84_28 endolysin seems to be a promising mild agent for disinfecting surfaces exposed to high temperatures.

1 January 2016 in Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
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JMJoanna Makowska
Joanna Makowska
KŻKrzysztof Żamojć
Krzysztof Żamojć
DWDariusz Wyrzykowski
Dariusz Wyrzykowski
DUDorota Uber
Dorota Uber
MWMałgorzata Wierzbicka
Małgorzata Wierzbicka
LCLech Chmurzyński
Lech Chmurzyński