Natalia Kulik

Mrs. Natalia Kulik

Center for Nanobiology and Structural Biology, Institute of Microbiology of the Czech Academy of Sciences
orcid

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 October 2023 in Journal of Agricultural and Food Chemistry
Verified
Journal Article
Open access
MKMichael Kotik
Michael Kotik
NKNatalia Kulik
Natalia Kulik
Kateřina ValentováKateřina Valentová
Kateřina Valentová
Flavonoids and their glycosides are abundant in many plant-based foods. The (de)glycosylation of flavonoids by retaining glycoside hydrolases has recently attracted much interest in basic and applied research, including the possibility of altering the glycosylation pattern of flavonoids. Research in this area is driven by significant differences in physicochemical, organoleptic, and bioactive properties between flavonoid aglycones and their glycosylated counterparts. While many flavonoid glycosides are present in nature at low levels, some occur in substantial quantities, making them readily available low-cost glycosyl donors for transglycosylations. Retaining glycosidases can be used to synthesize natural and novel glycosides, which serve as standards for bioactivity experiments and analyses, using flavonoid glycosides as glycosyl donors. Engineered glycosidases also prove valuable for the synthesis of flavonoid glycosides using chemically synthesized activated glycosyl donors. This review outlines the bioactivities of flavonoids and their glycosides and highlights the applications of retaining glycosidases in the context of flavonoid glycosides, acting as substrates, products, or glycosyl donors in deglycosylation or transglycosylation reactions.

12 May 2015 in Advanced Synthesis & Catalysis
Verified
Journal Article
Closed access
PDF file
KSKristýna Slámová
Kristýna Slámová
JKJana Krejzová
Jana Krejzová
PMPetr Marhol
Petr Marhol
LKLubica Kalachova
Lubica Kalachova
NKNatalia Kulik
Natalia Kulik
VKVladimír Křen
Vladimír Křen

1 November 2018 in Journal of Molecular Liquids
Verified
Journal Article
Closed access
PBPriyakshree Borthakur
Priyakshree Borthakur
PBPurna K. Boruah
Purna K. Boruah
MDManash R. Das
Manash R. Das
NKNatalia Kulik
Natalia Kulik
BMBabak Minofar
Babak Minofar

14 April 2010 in Glycobiology
Verified
Journal Article
Closed access
PDF file
KSKristýna Slámová
Kristýna Slámová
RGRadek Gažák
Radek Gažák
Pavla BojarováPavla Bojarová
Pavla Bojarová
NKNatalia Kulik
Natalia Kulik
Rudi EttrichRudi Ettrich
Rudi Ettrich
Vladimir KřenVladimir Křen
Vladimir Křen
β-N-Acetylhexosaminidases feature so-called wobbling specificity, which means that they cleave substrates both in gluco- and galacto- configurations, with the activity ratio depending on the enzyme source. Here we present the new finding that fungal β-N-acetylhexosaminidases are able to hydrolyze and transfer 4-deoxy-N-acetylhexosaminides with high yields. This clearly demonstrates that the 4-hydroxy moiety at the substrate pyranose ring is not essential for substrate binding to the enzyme active site, which was also confirmed by molecular docking of the tested compounds into the model of the active site of β-N-acetylhexosaminidase from Aspergillus oryzae. A set of four 4-deoxy-N-acetylhexosaminides was synthesized and screened against a panel of β-N-acetylhexosaminidases (extracellular and intracellular) from various sources (fungal, human, animal, plant and bacterial) for hydrolysis. The results of this screening are reported here, as well as the structures of three novel 4′-deoxy-disaccharides prepared by transglycosylation reaction with high yields (52% total disaccharide fraction) using β-N-acetylhexosaminidase from Talaromyces flavus.

1 June 2011 in The FEBS Journal
Verified
Journal Article
Closed access
PDF file
HRHelena Ryšlavá
Helena Ryšlavá
AKAlžběta Kalendová
Alžběta Kalendová
VDVeronika Doubnerová
Veronika Doubnerová
PSPřemysl Skočdopol
Přemysl Skočdopol
VKVinay Kumar
Vinay Kumar
KBKarel Bezouška
Karel Bezouška

30 August 2011 in Advanced Synthesis & Catalysis
Verified
Journal Article
Closed access
PDF file
Pavla BojarováPavla Bojarová
Pavla Bojarová
KSKristýna Slámová
Kristýna Slámová
KKKarel Křenek
Karel Křenek
RGRadek Gažák
Radek Gažák
NKNatalia Kulik
Natalia Kulik
Vladimir KřenVladimir Křen
Vladimir Křen