Ye Jee Shim

Prof. Ye Jee Shim

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Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 May 2019 in Orphanet Journal of Rare Diseases
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THThe Hereditary Hemolytic Anemia Working Party Of The Korean Society Of Hematology
The Hereditary Hemolytic Anemia Working Party Of The Korean Society Of Hematology
HCHyoung Soo Choi
Hyoung Soo Choi
QCQute Choi
Qute Choi
JKJung-Ah Kim
Jung-Ah Kim
KIKyong Ok Im
Kyong Ok Im
DLDong-Soon Lee
Dong-Soon Lee
Current diagnostic tests for hereditary spherocytosis (HS) focus on the detection of hemolysis or indirectly assessing defects of membrane protein, whereas direct methods to detect protein defects are complicated and difficult to implement. In the present study, we investigated the patterns of genetic variation associated with HS among patients clinically diagnosed with HS. Multi-gene targeted sequencing of 43 genes (17 RBC membrane protein-encoding genes, 20 RBC enzyme-encoding genes, and six additional genes for the differential diagnosis) was performed using the Illumina HiSeq platform. Among 59 patients with HS, 50 (84.7%) had one or more significant variants in a RBC membrane protein-encoding genes. A total of 54 significant variants including 46 novel mutations were detected in six RBC membrane protein-encoding genes, with the highest number of variants found in SPTB (n = 28), and followed by ANK1 (n = 19), SLC4A1 (n = 3), SPTA1 (n = 2), EPB41 (n = 1), and EPB42 (n = 1). Concurrent mutations of genes encoding RBC enzymes (ALDOB, GAPDH, and GSR) were detected in three patients. UGT1A1 mutations were present in 24 patients (40.7%). Positive rate of osmotic fragility test was 86.8% among patients harboring HS-related gene mutations. This constitutes the first large-scaled genetic study of Korean patients with HS. We demonstrated that multi-gene target sequencing is sensitive and feasible that can be used as a powerful tool for diagnosing HS. Considering the discrepancies of clinical and molecular diagnoses of HS, our findings suggest that molecular genetic analysis is required for accurate diagnosis of HS.

21 June 2018 in Psycho-Oncology
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Journal Article
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MPMeerim Park
Meerim Park
HPHyeon Jin Park
Hyeon Jin Park
JLJae Min Lee
Jae Min Lee
HJHee Young Ju
Hee Young Ju
BPByung Kiu Park
Byung Kiu Park
HSHee Young Shin
Hee Young Shin

15 November 2013 in Cytometry Part B: Clinical Cytometry
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Journal Article
Closed access
YSYe Jee Shim
Ye Jee Shim
DWDong-Il Won
Dong-Il Won

20 April 2020 in Pediatric Research
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Journal Article
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MPMeerim Park
Meerim Park
HJHye Lim Jung
Hye Lim Jung
YSYe Jee Shim
Ye Jee Shim
HKHeung Sik Kim
Heung Sik Kim
HYHoi Soo Yoon
Hoi Soo Yoon
YCYoung Bae Choi
Young Bae Choi

1 January 2018 in Blood Research
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Journal Article
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MJMin Ji Jin
Min Ji Jin
YKYunkyum Kim
Yunkyum Kim
ECEun Mi Choi
Eun Mi Choi
YSYe Jee Shim
Ye Jee Shim
HKHeung Sik Kim
Heung Sik Kim
JHJeong Ok Hah
Jeong Ok Hah
Jin MJ, et al. Blood Res. 2018 Jun;53(2):110-116. https://doi.org/10.5045/br.2018.53.2.110

7 March 2015 in Hormone Research in Paediatrics
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Journal Article
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YSYe Jee Shim
Ye Jee Shim
JKJung Eun Kim
Jung Eun Kim
SHSu-Kyeong Hwang
Su-Kyeong Hwang
BCBong Seok Choi
Bong Seok Choi
BCByung Ho Choi
Byung Ho Choi
CKCheol Woo Ko
Cheol Woo Ko
Aims: To date, 13 genes causing maturity-onset diabetes of the young (MODY) have been identified. However, there is a big discrepancy in the genetic locus between Asian and Caucasian patients with MODY. Thus, we conducted whole-exome sequencing in Korean MODY families to identify causative gene variants. Methods: Six MODY probands and their family members were included. Variants in the dbSNP135 and TIARA databases for Koreans and the variants with minor allele frequencies >0.5% of the 1000 Genomes database were excluded. We selected only the functional variants (gain of stop codon, frameshifts and nonsynonymous single-nucleotide variants) and conducted a case-control comparison in the family members. The selected variants were scanned for the previously introduced gene set implicated in glucose metabolism. Results: Three variants c.620C>T:p.Thr207Ile in PTPRD, c.559C>G:p.Gln187Glu in SYT9, and c.1526T>G:p.Val509Gly in WFS1 were respectively identified in 3 families. We could not find any disease-causative alleles of known MODY 1-13 genes. Based on the predictive program, Thr207Ile in PTPRD was considered pathogenic. Conclusions: Whole-exome sequencing is a valuable method for the genetic diagnosis of MODY. Further evaluation is necessary about the role of PTPRD, SYT9 and WFS1 in normal insulin release from pancreatic beta cells.