Mohammad Shamim Ahasan

Dr. Mohammad Shamim Ahasan


Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 October 2017 in FEMS Microbiology Ecology
Verified
Journal Article
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MAMohammad Shamim Ahasan
Mohammad Shamim Ahasan
TWThomas B Waltzek
Thomas B Waltzek
RHRoger Huerlimann
Roger Huerlimann
EAEllen Ariel
Ellen Ariel
Green turtles (Chelonia mydas) are endangered marine herbivores that break down food particles, primarily sea grasses, through microbial fermentation. However, the microbial community and its role in health and disease is still largely unexplored. In this study, we investigated and compared the fecal bacterial communities of eight wild-captured green turtles to four stranded turtles in the central Great Barrier Reef regions that include Bowen and Townsville. We used high-throughput sequencing analysis targeting the hypervariable V1–V3 regions of the bacterial 16S rRNA gene. At the phylum level, Firmicutes predominated among wild-captured green turtles, followed by Bacteroidetes and Proteobacteria. In contrast, Proteobacteria (Gammaproteobacteria) was the most significantly dominant phylum among all stranded turtles, followed by Bacteroidetes and Firmicutes. In addition, Fusobacteria was also significantly abundant in stranded turtles. No significant differences were found between the wild-captured turtles in Bowen and Townsville. At the family level, the core bacterial community consisted of 25 families that were identified in both the wild-captured and stranded green turtles, while two unique sets of 14 families each were only found in stranded or wild-captured turtles. The predominance of Bacteroides in all groups indicates the importance of these bacteria in turtle gut health. In terms of bacterial diversity and richness, wild-captured green turtles showed a higher bacterial diversity and richness compared with stranded turtles. The marked differences in the bacterial communities between wild-captured and stranded turtles suggest the possible dysbiosis in stranded turtles in addition to potential causal agents.

1 July 2017 in Marine Pollution Bulletin
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Journal Article
Closed access
MAMohammad Shamim Ahasan
Mohammad Shamim Ahasan
JPJacqueline Picard
Jacqueline Picard
LELisa Elliott
Lisa Elliott
RKRobert Kinobe
Robert Kinobe
LOLeigh Owens
Leigh Owens
EAEllen Ariel
Ellen Ariel

23 January 2020 in Microbiology Resource Announcements
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Journal Article
Open access
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MAMohammad Shamim Ahasan
Mohammad Shamim Ahasan
WKWilliam Keleher
William Keleher
CGCem Giray
Cem Giray
BPBrenda Perry
Brenda Perry
Win SurachetpongWin Surachetpong
Win Surachetpong
TWThomas B Waltzek
Thomas B Waltzek
Here, we present the complete coding sequences of two tilapia lake virus (TiLV) isolates recovered during an investigation of a mortality event in farmed Nile tilapia in the United States. Phylogenetic analysis supported the isolates as each other’s closest relatives and members of a clade of Thai TiLV strains.

15 September 2016 in Tropical Animal Health and Production
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Journal Article
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MAMohammad Shamim Ahasan
Mohammad Shamim Ahasan
SRSiddiqur Rahman
Siddiqur Rahman
A K M Anisur RahmanA K M Anisur Rahman
A K M Anisur Rahman
DBDirk Berkvens
Dirk Berkvens

28 June 2018 in Microbiology Resource Announcements
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Journal Article
Open access
LALowia Al-Hussinee
Lowia Al-Hussinee
KSKuttichantran Subramaniam
Kuttichantran Subramaniam
MAMohammad Shamim Ahasan
Mohammad Shamim Ahasan
BKBill Keleher
Bill Keleher
TWThomas B Waltzek
Thomas B Waltzek
Since its discovery in 2014, tilapia lake virus (TiLV) has emerged as a significant cause of mortality in tilapia cultured in Asia, Africa, and South America. Here, we report the complete genome sequence of a TiLV isolate obtained during a diagnostic investigation of an ongoing mortality event involving Nile tilapia cultured in Thailand.