Ana Rita Lima

Dr. Ana Rita Lima

Faculty of Pharmacy, University of Porto, Porto, Portugal
orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2016 in Translational Oncology
Verified
Journal Article
Open access
ALAna Rita Lima
Ana Rita Lima
MBMaria de Lourdes Bastos
Maria de Lourdes Bastos
Márcia CarvalhoMárcia Carvalho
Márcia Carvalho
Paula Guedes de PinhoPaula Guedes de Pinho
Paula Guedes de Pinho
Prostate cancer (PCa) is the most frequently diagnosed cancer and the second leading cause of cancer death among men in Western countries. Current screening techniques are based on the measurement of serum prostate specific antigen (PSA) levels and digital rectal examination. A decisive diagnosis of PCa is based on prostate biopsies; however, this approach can lead to false-positive and false-negative results. Therefore, it is important to discover new biomarkers for the diagnosis of PCa, preferably noninvasive ones. Metabolomics is an approach that allows the analysis of the entire metabolic profile of a biological system. As neoplastic cells have a unique metabolic phenotype related to cancer development and progression, the identification of dysfunctional metabolic pathways using metabolomics can be used to discover cancer biomarkers and therapeutic targets. In this study, we review several metabolomics studies performed in prostatic fluid, blood plasma/serum, urine, tissues and immortalized cultured cell lines with the objective of discovering alterations in the metabolic phenotype of PCa and thus discovering new biomarkers for the diagnosis of PCa. Encouraging results using metabolomics have been reported for PCa, with sarcosine being one of the most promising biomarkers identified to date. However, the use of sarcosine as a PCa biomarker in the clinic remains a controversial issue within the scientific community. Beyond sarcosine, other metabolites are considered to be biomarkers for PCa, but they still need clinical validation. Despite the lack of metabolomics biomarkers reaching clinical practice, metabolomics proved to be a powerful tool in the discovery of new biomarkers for PCa detection.

7 October 2019 in British Journal of Cancer
Verified
Journal Article
Open access
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ALAna Rita Lima
Ana Rita Lima
Joana PintoJoana Pinto
Joana Pinto
AAAna Isabel Azevedo
Ana Isabel Azevedo
DSDaniela Barros Silva
Daniela Barros Silva
Carmen JeronimoCarmen Jeronimo
Carmen Jeronimo
Márcia CarvalhoMárcia Carvalho
Márcia Carvalho
Background: The lack of sensitive and specific biomarkers for the early detection of prostate cancer (PCa) is a major hurdle to improve patient management. Methods: A metabolomics approach based on GC-MS was used to investigate the performance of volatile organic compounds (VOCs) in general and, more specifically, volatile carbonyl compounds (VCCs) present in urine as potential markers for PCa detection. Results: Results showed that PCa patients (n = 40) can be differentiated from cancer-free subjects (n = 42) based on their urinary volatile profile in both VOCs and VCCs models, unveiling significant differences in the levels of several metabolites. The models constructed were further validated using an external validation set (n = 18 PCa and n = 18 controls) to evaluate sensitivity, specificity and accuracy of the urinary volatile profile to discriminate PCa from controls. The VOCs model disclosed 78% sensitivity, 94% specificity and 86% accuracy, whereas the VCCs model achieved the same sensitivity, a specificity of 100% and an accuracy of 89%. Our findings unveil a panel of 6 volatile compounds significantly altered in PCa patients’ urine samples that was able to identify PCa, with a sensitivity of 89%, specificity of 83%, and accuracy of 86%. Conclusions: It is disclosed a biomarker panel with potential to be used as a non-invasive diagnostic tool for PCa.

3 April 2018 in Scientific Reports
Verified
Journal Article
Open access
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ALAna Rita Lima
Ana Rita Lima
Ana Margarida AraújoAna Margarida Araújo
Ana Margarida Araújo
Joana PintoJoana Pinto
Joana Pinto
Carmen JeronimoCarmen Jeronimo
Carmen Jeronimo
Rui HenriqueRui Henrique
Rui Henrique
Paula Guedes de PinhoPaula Guedes de Pinho
Paula Guedes de Pinho
Serum prostate-specific antigen (PSA) is currently the most used biomarker in clinical practice for prostate cancer (PCa) detection. However, this biomarker has several drawbacks. In this work, an untargeted gas chromatography-mass spectrometry (GC-MS)-based metabolomic profiling of PCa cells was performed to prove the concept that metabolic alterations might differentiate PCa cell lines from normal prostate cell line. For that, we assessed the differences in volatile organic compounds (VOCs) profile in the extracellular medium (exometabolome) of four PCa cell lines and one normal prostate cell line at two pH values (pH 2 and 7) by GC-MS. Multivariate analysis revealed a panel of volatile metabolites that discriminated cancerous from normal prostate cells. The most altered metabolites included ketones, aldehydes and organic acids. Among these, we highlight pentadecane-2-one and decanoic acid, which were significantly increased in PCa compared to normal cells, and cyclohexanone, 4-methylheptan-2-one, 2-methylpentane-1,3-diol, 4-methylbenzaldehyde, 1-(3,5-dimethylfuran-2-yl)ethanone, methyl benzoate and nonanoic acid, which were significantly decreased in PCa cells. The PCa volatilome was markedly influenced by the VOCs extraction pH, though the discriminant capability was similar. Overall, our data suggest that VOCs monitoring has the potential to be used as a PCa screening methodology.

19 March 2021 in Metabolites
Verified
Journal Article
Open access
PDF file
ALAna Rita Lima
Ana Rita Lima
Joana PintoJoana Pinto
Joana Pinto
FAFilipa Amaro
Filipa Amaro
MBMaria de Lourdes Bastos
Maria de Lourdes Bastos
Márcia CarvalhoMárcia Carvalho
Márcia Carvalho
Paula Guedes de PinhoPaula Guedes de Pinho
Paula Guedes de Pinho
Prostate cancer (PCa) is the second most diagnosed cancer in men worldwide. For its screening, serum prostate specific antigen (PSA) test has been largely performed over the past decade, despite its lack of accuracy and inability to distinguish indolent from aggressive disease. Metabolomics has been widely applied in cancer biomarker discovery due to the well-known metabolic reprogramming characteristic of cancer cells. Most of the metabolomic studies have reported alterations in urine of PCa patients due its noninvasive collection, but the analysis of prostate tissue metabolome is an ideal approach to disclose specific modifications in PCa development. This review aims to summarize and discuss the most recent findings from tissue and urine metabolomic studies applied to PCa biomarker discovery. Eighteen metabolites were found consistently altered in PCa tissue among different studies, including alanine, arginine, uracil, glutamate, fumarate, and citrate. Urine metabolomic studies also showed consistency in the dysregulation of 15 metabolites and, interestingly, alterations in the levels of valine, taurine, leucine and citrate were found in common between urine and tissue studies. These findings unveil that the impact of PCa development in human metabolome may offer a promising strategy to find novel biomarkers for PCa diagnosis.

26 March 2021 in Metabolites
Verified
Journal Article
Open access
PDF file
Joana PintoJoana Pinto
Joana Pinto
ÂCÂngela Carapito
Ângela Carapito
FAFilipa Amaro
Filipa Amaro
ALAna Rita Lima
Ana Rita Lima
CCCarina Carvalho-Maia
Carina Carvalho-Maia
Paula Guedes de PinhoPaula Guedes de Pinho
Paula Guedes de Pinho
Timely diagnosis is crucial to improve the long-term survival of bladder cancer (BC) patients. The discovery of new BC biomarkers based in urine analysis is very attractive because this biofluid is in direct contact with the inner bladder layer, in which most of the neoplasms develop, and is non-invasively collected. Hence, this work aimed to unveil alterations in the urinary volatile profile of patients diagnosed with BC compared with cancer-free individuals, as well as differences among patients diagnosed at different tumor stages, to identify candidate biomarkers for non-invasive BC diagnosis and staging. Urine analysis was performed by headspace solid-phase microextraction coupled with gas chromatography-mass spectrometry (HS-SPME-GC-MS). The results unveiled that BC patients have a distinct urinary volatile profile characterized by higher levels of several alkanes and aromatic compounds, and lower levels of aldehydes, ketones and monoterpenes. Seventeen significantly altered volatiles were used to evaluate the performance for overall BC detection, disclosing 70% sensitivity, 89% specificity and 80% accuracy. Moreover, distinct urinary volatile profiles were found among patients diagnosed at different tumor stages (Ta/Tis, T1 and ≥T2). This work identified distinct urinary volatile signatures of BC patients with potential for non-invasive detection and staging of bladder cancer.

2 April 2021 in Journal of Proteome Research
Verified
Journal Article
Closed access
Joana PintoJoana Pinto
Joana Pinto
FAFilipa Amaro
Filipa Amaro
ALAna Rita Lima
Ana Rita Lima
CCCarina Carvalho-Maia
Carina Carvalho-Maia
Carmen JeronimoCarmen Jeronimo
Carmen Jeronimo
Paula Guedes de PinhoPaula Guedes de Pinho
Paula Guedes de Pinho