Shuangli Mi

Prof. Dr. Shuangli Mi

Beijing Institute of Genomics, Chinese Academy of Sciences, China National Center for Bioinformation
orcid

Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 February 2015 in Genomics, Proteomics & Bioinformatics
Verified
Journal Article
Open access
JZJian Zhang
Jian Zhang
SLSha Li
Sha Li
LLLu Li
Lu Li
MLMeng Li
Meng Li
CGChongye Guo
Chongye Guo
Shuangli MiShuangli Mi
Shuangli Mi
Exosomes are 40–100 nm nano-sized vesicles that are released from many cell types into the extracellular space. Such vesicles are widely distributed in various body fluids. Recently, mRNAs and microRNAs (miRNAs) have been identified in exosomes, which can be taken up by neighboring or distant cells and subsequently modulate recipient cells. This suggests an active sorting mechanism of exosomal miRNAs, since the miRNA profiles of exosomes may differ from those of the parent cells. Exosomal miRNAs play an important role in disease progression, and can stimulate angiogenesis and facilitate metastasis in cancers. In this review, we will introduce the origin and the trafficking of exosomes between cells, display current research on the sorting mechanism of exosomal miRNAs, and briefly describe how exosomes and their miRNAs function in recipient cells. Finally, we will discuss the potential applications of these miRNA-containing vesicles in clinical settings.

11 December 2007 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
PDF file
Shuangli MiShuangli Mi
Shuangli Mi
JLJun Lu
Jun Lu
MSMiao Sun
Miao Sun
ZLZejuan Li
Zejuan Li
HZHao Zhang
Hao Zhang
JCJianjun Chen
Jianjun Chen
Acute lymphoblastic leukemia (ALL) is the most common childhood cancer, whereas acute myeloid leukemia (AML) is the most common acute leukemia in adults. In general, ALL has a better prognosis than AML. To understand the distinct mechanisms in leukemogenesis between ALL and AML and to identify markers for diagnosis and treatment, we performed a large-scale genome-wide microRNA (miRNA, miR) expression profiling assay and identified 27 miRNAs that are differentially expressed between ALL and AML. Among them, miR-128a and -128b are significantly overexpressed, whereas let-7b and miR-223 are significantly down-regulated in ALL compared with AML. They are the most discriminatory miRNAs between ALL and AML. Using the expression signatures of a minimum of two of these miRNAs resulted in an accuracy rate of >95% in the diagnosis of ALL and AML. The differential expression patterns of these four miRNAs were validated further through large-scale real-time PCR on 98 acute leukemia samples covering most of the common cytogenetic subtypes, along with 10 normal control samples. Furthermore, we found that overexpression of miR-128 in ALL was at least partly associated with promoter hypomethylation and not with an amplification of its genomic locus. Taken together, we showed that expression signatures of as few as two miRNAs could accurately discriminate ALL from AML, and that epigenetic regulation might play an important role in the regulation of expression of miRNAs in acute leukemias.

7 October 2008 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
PDF file
ZLZejuan Li
Zejuan Li
JLJun Lu
Jun Lu
MSMiao Sun
Miao Sun
Shuangli MiShuangli Mi
Shuangli Mi
HZHao Zhang
Hao Zhang
JCJianjun Chen
Jianjun Chen
MicroRNAs (miRNAs) are postulated to be important regulators in cancers. Here, we report a genome-wide miRNA expression analysis in 52 acute myeloid leukemia (AML) samples with common translocations, including t(8;21)/ AML1(RUNX1)-ETO(RUNX1T1) , inv( 16 )/ CBFB-MYH11 , t(15;17)/ PML-RARA , and MLL rearrangements. Distinct miRNA expression patterns were observed for t(15;17), MLL rearrangements, and core-binding factor (CBF) AMLs including both t(8;21) and inv( 16 ) samples. Expression signatures of a minimum of two (i.e., miR-126/126*), three (i.e., miR-224, miR-368, and miR-382), and seven (miR-17–5p and miR-20a, plus the aforementioned five) miRNAs could accurately discriminate CBF, t(15;17), and MLL -rearrangement AMLs, respectively, from each other. We further showed that the elevated expression of miR-126/126* in CBF AMLs was associated with promoter demethylation but not with amplification or mutation of the genomic locus. Our gain- and loss-of-function experiments showed that miR-126/126* inhibited apoptosis and increased the viability of AML cells and enhanced the colony-forming ability of mouse normal bone marrow progenitor cells alone and particularly, in cooperation with AML1-ETO , likely through targeting Polo-like kinase 2 ( PLK2 ), a tumor suppressor. Our results demonstrate that specific alterations in miRNA expression distinguish AMLs with common translocations and imply that the deregulation of specific miRNAs may play a role in the development of leukemia with these associated genetic rearrangements.

9 February 2014 in Nature Genetics
Verified
Journal Article
Closed access
PDF file
XZXiaofan Zhu
Xiaofan Zhu
FHFuhong He
Fuhong He
HZHuimin Zeng
Huimin Zeng
SLShaoping Ling
Shaoping Ling
ACAili Chen
Aili Chen
QWQian-Fei Wang
Qian-Fei Wang

5 February 2018 in Nature Neuroscience
Verified
Journal Article
Closed access
PDF file
YZYi Zheng
Yi Zheng
WSWei Shen
Wei Shen
JZJian Zhang
Jian Zhang
BYBo Yang
Bo Yang
YLYao-Nan Liu
Yao-Nan Liu
JYJun Yao
Jun Yao

23 February 2010 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
PDF file
Shuangli MiShuangli Mi
Shuangli Mi
ZLZejuan Li
Zejuan Li
PCPing Chen
Ping Chen
CHChunjiang He
Chunjiang He
DCDonglin Cao
Donglin Cao
JCJianjun Chen
Jianjun Chen
MicroRNA (miRNA)- 17-92 cluster (miR-17-92), containing seven individual miRNAs, is frequently amplified and overexpressed in lymphomas and various solid tumors. We have found that it is also frequently amplified and the miRNAs are aberrantly overexpressed in mixed lineage leukemia ( MLL )-rearranged acute leukemias. Furthermore, we show that MLL fusions exhibit a much stronger direct binding to the locus of this miRNA cluster than does wild-type MLL; these changes are associated with elevated levels of histone H3 acetylation and H3K4 trimethylation and an up-regulation of these miRNAs. We further observe that forced expression of this miRNA cluster increases proliferation and inhibits apoptosis of human cells. More importantly, we show that this miRNA cluster can significantly increase colony-forming capacity of normal mouse bone marrow progenitor cells alone and, particularly, in cooperation with MLL fusions. Finally, through combinatorial analysis of miRNA and mRNA arrays of mouse bone marrow progenitor cells transfected with this miRNA cluster and/or MLL fusion gene, we identified 363 potential miR-17-92 target genes that exhibited a significant inverse correlation of expression with the miRNAs. Remarkably, these potential target genes are significantly enriched ( P < 0.01; >2-fold) in cell differentiation, hematopoiesis, cell cycle, and apoptosis. Taken together, our studies suggest that overexpression of miR-17-92 cluster in MLL -rearranged leukemias is likely attributed to both DNA copy number amplification and direct up-regulation by MLL fusions, and that the miRNAs in this cluster may play an essential role in the development of MLL -associated leukemias through inhibiting cell differentiation and apoptosis, while promoting cell proliferation, by regulating relevant target genes.