Cole Haynes

Dr. Cole Haynes


Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2016 in Current Biology
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Journal Article
Closed access
CFChristopher J. Fiorese
Christopher J. Fiorese
ASAnna M. Schulz
Anna M. Schulz
YLYi-Fan Lin
Yi-Fan Lin
NRNadine Rosin
Nadine Rosin
MPMark W. Pellegrino
Mark W. Pellegrino
CHCole Haynes
Cole Haynes

9 February 2018 in Cell Research
Verified
Journal Article
Open access
PDF file
AMAndrew Melber
Andrew Melber
CHCole Haynes
Cole Haynes
The mitochondrial network is not only required for the production of energy, essential cofactors and amino acids, but also serves as a signaling hub for innate immune and apoptotic pathways. Multiple mechanisms have evolved to identify and combat mitochondrial dysfunction to maintain the health of the organism. One such pathway is the mitochondrial unfolded protein response (UPRmt), which is regulated by the mitochondrial import efficiency of the transcription factor ATFS-1 in C. elegans and potentially orthologous transcription factors in mammals (ATF4, ATF5, CHOP). Upon mitochondrial dysfunction, import of ATFS-1 into mitochondria is reduced, allowing it to be trafficked to the nucleus where it promotes the expression of genes that promote survival and recovery of the mitochondrial network. Here, we discuss recent findings underlying UPRmt signal transduction and how this adaptive transcriptional response may interact with other mitochondrial stress response pathways.

1 June 2020 in Trends in Cell Biology
Verified
Journal Article
Closed access
NANadine S. Anderson
Nadine S. Anderson
CHCole Haynes
Cole Haynes

7 January 2019 in Cold Spring Harbor Perspectives in Biology
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Journal Article
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NNNandhitha Uma Naresh
Nandhitha Uma Naresh
CHCole Haynes
Cole Haynes
The mitochondrial proteome encompasses more than a thousand proteins, which are encoded by the mitochondrial and nuclear genomes. Mitochondrial biogenesis and network health relies on maintenance of protein import pathways and the protein-folding environment. Cell-extrinsic or -intrinsic stressors that challenge mitochondrial proteostasis negatively affect organellar function. During conditions of stress, cells use impaired protein import as a sensor for mitochondrial dysfunction to activate a stress response called the mitochondrial unfolded protein response (UPRmt). UPRmt activation leads to an adaptive transcriptional program that promotes mitochondrial recovery, metabolic adaptations, and innate immunity. In this review, we discuss the regulation of UPRmt activation as well as its role in maintaining mitochondrial homeostasis in physiological and pathological scenarios.

20 January 2021 in Nature Communications
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Journal Article
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PDF file
TSTomer Shpilka
Tomer Shpilka
YDYunGuang Du
YunGuang Du
QYQiyuan Yang
Qiyuan Yang
AMAndrew Melber
Andrew Melber
NNNandhitha Uma Naresh
Nandhitha Uma Naresh
CHCole Haynes
Cole Haynes
As organisms develop, individual cells generate mitochondria to fulfill physiological requirements. However, it remains unknown how mitochondrial network expansion is scaled to cell growth. The mitochondrial unfolded protein response (UPRmt) is a signaling pathway mediated by the transcription factor ATFS-1 which harbors a mitochondrial targeting sequence (MTS). Here, using the model organismCaenorhabditis eleganswe demonstrate that ATFS-1 mediates an adaptable mitochondrial network expansion program that is active throughout normal development. Mitochondrial network expansion requires the relatively inefficient MTS in ATFS-1, which allows the transcription factor to be responsive to parameters that impact protein import capacity of the mitochondrial network. Increasing the strength of the ATFS-1 MTS impairs UPRmtactivity by increasing accumulation within mitochondria. Manipulations of TORC1 activity increase or decrease ATFS-1 activity in a manner that correlates with protein synthesis. Lastly, expression of mitochondrial-targeted GFP is sufficient to expand the muscle cell mitochondrial network in an ATFS-1-dependent manner. We propose that mitochondrial network expansion during development is an emergent property of the synthesis of highly expressed mitochondrial proteins that exclude ATFS-1 from mitochondrial import, causing UPRmtactivation.

1 December 2017 in Seminars in Cancer Biology
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Journal Article
Closed access
PDPan Deng
Pan Deng
CHCole Haynes
Cole Haynes