Dayu Zhang

Dr. Dayu Zhang


Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 August 2014 in Genome Biology
Verified
Journal Article
Open access
PDF file
HLHangnoh Lee
Hangnoh Lee
CMC Joel McManus
C Joel McManus
DCDong-Yeon Cho
Dong-Yeon Cho
MEMatthew Eaton
Matthew Eaton
FRFioranna Renda
Fioranna Renda
DMDavid M. MacAlpine
David M. MacAlpine
Background: Structural rearrangements of the genome resulting in genic imbalance due to copy number change are often deleterious at the organismal level, but are common in immortalized cell lines and tumors, where they may be an advantage to cells. In order to explore the biological consequences of copy number changes in the Drosophila genome, we resequenced the genomes of 19 tissue-culture cell lines and generated RNA-Seq profiles. Results: Our work revealed dramatic duplications and deletions in all cell lines. We found three lines of evidence indicating that copy number changes were due to selection during tissue culture. First, we found that copy numbers correlated to maintain stoichiometric balance in protein complexes and biochemical pathways, consistent with the gene balance hypothesis. Second, while most copy number changes were cell line-specific, we identified some copy number changes shared by many of the independent cell lines. These included dramatic recurrence of increased copy number of the PDGF/VEGF receptor, which is also over-expressed in many cancer cells, and of bantam, an anti-apoptosis miRNA. Third, even when copy number changes seemed distinct between lines, there was strong evidence that they supported a common phenotypic outcome. For example, we found that proto-oncogenes were over-represented in one cell line (S2-DRSC), whereas tumor suppressor genes were under-represented in another (Kc167). Conclusion: Our study illustrates how genome structure changes may contribute to selection of cell lines in vitro. This has implications for other cell-level natural selection progressions, including tumorigenesis.

17 June 2019 in Environmental Science and Pollution Research
Verified
Journal Article
Closed access
PDF file
YXYongjian Xie
Yongjian Xie
QHQianqian Huang
Qianqian Huang
YRYuqing Rao
Yuqing Rao
LHLiang Hong
Liang Hong
DZDayu Zhang
Dayu Zhang

21 February 2023 in Molecules
Verified
Journal Article
Open access
PDF file
XYXi Yang
Xi Yang
CJChunzhe Jin
Chunzhe Jin
ZWZiwei Wu
Ziwei Wu
HHHui Han
Hui Han
ZZZhilin Zhang
Zhilin Zhang
DZDayu Zhang
Dayu Zhang
The volatile metabolites of Salvia sclarea, Rosmarinus officinalis, Thymus serpyllum, Mentha spicata, Melissa officinalis, Origanum majorana, Mentha piperita, Ocimum basilicum and Lavandula angustifolia were determined by gas chromatography–mass spectrometry. The vapor insecticidal properties of the analyzed essential oils and their compounds were screened using Reticulitermes dabieshanensis workers. The most effective oils were S. sclarea (major constituent linalyl acetate, 65.93%), R. officinalis (1,8-cineole, 45.56%), T. serpyllum (thymol, 33.59%), M. spicata (carvone, 58.68%), M. officinalis (citronellal, 36.99%), O. majorana (1,8-cineole, 62.29%), M. piperita (menthol, 46.04%), O. basilicum (eugenol, 71.08%) and L. angustifolia (linalool, 39.58%), which exhibited LC50 values ranging from 0.036 to 1.670 μL/L. The lowest LC50 values were recorded for eugenol (0.060 μL/L), followed by thymol (0.062 μL/L), carvone (0.074 μL/L), menthol (0.242 μL/L), linalool (0.250 μL/L), citronellal (0.330 μL/L), linalyl acetate (0.712 μL/L) and 1,8-cineole (1.478 μL/L). The increased activity of esterases (ESTs) and glutathione S-transferase (GST) were observed but only alongside the decreased activity of acetylcholinesterase (AChE) in eight main components. Our results indicate that S. sclarea, R. officinalis, T. serpyllum, M. spicata, M. officinalis, O. marjorana, M. piperita, O. basilicum and L. angustifolia essential oils (EOs) and their compounds, linalyl acetate, 1,8-cineole, thymol, carvone, citronellal, menthol, eugenol and linalool could be developed as control agents against termites.

1 February 2020 in Journal of Insect Physiology
Verified
Journal Article
Closed access
QWQian Wang
Qian Wang
QWQi Wang
Qi Wang
HLHongyue Li
Hongyue Li
LSLiang Sun
Liang Sun
DZDayu Zhang
Dayu Zhang
YZYongjun Zhang
Yongjun Zhang

26 July 2019 in Frontiers in Physiology
Verified
Journal Article
Open access
SWShengyin Wang
Shengyin Wang
BLBaoling Li
Baoling Li
DZDayu Zhang
Dayu Zhang
The functions of cuticular hydrocarbons (CHCs) are varied in insects, but one example is to reduce water loss. Previous work has suggested that biosynthesis of CHCs is strongly related to the CYP4G sub-family. Targeting these genes in the brown planthopper, Nilaparvata lugens Stål, might be a new application for integrated pest management. Therefore, we explored the functions of CYP4G76 (GenBank: KM217045.1) and CYP4G115 (GenBank: KM217046.1) genes in this study. The desiccation treatment (RH < 5%) for the duration of 1–3 days significantly increased the transcription level of CYP4G76 and CYP4G115. RNAi through the injection of CYP4G76 and CYP4G115 dsRNA could significantly decrease their expression, respectively, and further reduced the biosynthesis of CHCs, i.e., saturated and straight-chain alkanes. When CYP4G76 and CYP4G115 were suppressed, the susceptibility of N. lugens nymphs to desiccation increased, due to the deficiency of the CHCs in the insect’s cuticle. When the expression of CYP4G76 and CYP4G115 was decreased, this resulted in an increased rate of penetration of the four insecticides: pymetrozine, imidacloprid, thiamethoxam and buprofezin. Therefore, CYP4G76 and CYP4G115 appear to regulate the biosynthesis of CHCs in N. lugens nymphs, which play a major role in protecting insects from water loss and the penetration of insecticides. CYP4G76 and CYP4G115 might be used as a novel target in integrated pest management to N. lugens.

7 March 2019 in Insect Molecular Biology
Verified
Journal Article
Closed access
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SWSheng Yin Wang
Sheng Yin Wang
JPJennifer Hackney Price
Jennifer Hackney Price
DZDayu Zhang
Dayu Zhang