Patrick Van Der Wel

Dr. Patrick Van Der Wel

orcid

Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 February 2008 in The Journal of Chemical Physics
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Journal Article
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TMThorsten Maly
Thorsten Maly
GDGalia T. Debelouchina
Galia T. Debelouchina
VBVikram S. Bajaj
Vikram S. Bajaj
KHKan-Nian Hu
Kan-Nian Hu
CJChan-Gyu Joo
Chan-Gyu Joo
RGRobert G. Griffin
Robert G. Griffin
Dynamic nuclear polarization (DNP) is a method that permits NMR signal intensities of solids and liquids to be enhanced significantly, and is therefore potentially an important tool in structural and mechanistic studies of biologically relevant molecules. During a DNP experiment, the large polarization of an exogeneous or endogeneous unpaired electron is transferred to the nuclei of interest (I) by microwave (μw) irradiation of the sample. The maximum theoretical enhancement achievable is given by the gyromagnetic ratios (γe∕γl) , being ∼660 for protons. In the early 1950s, the DNP phenomenon was demonstrated experimentally, and intensively investigated in the following four decades, primarily at low magnetic fields. This review focuses on recent developments in the field of DNP with a special emphasis on work done at high magnetic fields (⩾5T) , the regime where contemporary NMR experiments are performed. After a brief historical survey, we present a review of the classical continuous wave (cw) DNP mechanisms—the Overhauser effect, the solid effect, the cross effect, and thermal mixing. A special section is devoted to the theory of coherent polarization transfer mechanisms, since they are potentially more efficient at high fields than classical polarization schemes. The implementation of DNP at high magnetic fields has required the development and improvement of new and existing instrumentation. Therefore, we also review some recent developments in μw and probe technology, followed by an overview of DNP applications in biological solids and liquids. Finally, we outline some possible areas for future developments.

7 February 2023 in Nature Communications
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HHHamoon Hemmatpour
Hamoon Hemmatpour
Oreste De LucaOreste De Luca
Oreste De Luca
DCDominic Crestani
Dominic Crestani
MSMarc C.A. Stuart
Marc C.A. Stuart
ALAlessia Lasorsa
Alessia Lasorsa
Petra RudolfPetra Rudolf
Petra Rudolf
Polydopamine is a biomimetic self-adherent polymer, which can be easily deposited on a wide variety of materials. Despite the rapidly increasing interest in polydopamine-based coatings, the polymerization mechanism and the key intermediate species formed during the deposition process are still controversial. Herein, we report a systematic investigation of polydopamine formation on halloysite nanotubes; the negative charge and high surface area of halloysite nanotubes favour the capture of intermediates that are involved in polydopamine formation and decelerate the kinetics of the process, to unravel the various polymerization steps. Data from X-ray photoelectron and solid-state nuclear magnetic resonance spectroscopies demonstrate that in the initial stage of polydopamine deposition, oxidative coupling reaction of the dopaminechrome molecules is the main reaction pathway that leads to formation of polycatecholamine oligomers as an intermediate and the post cyclization of the linear oligomers occurs subsequently. Furthermore, TRIS molecules are incorporated into the initially formed oligomers.

1 August 2008 in Applied Magnetic Resonance
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Journal Article
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ABA. B. Barnes
A. B. Barnes
GPG. De Paëpe
G. De Paëpe
PWPatrick Van Der Wel
Patrick Van Der Wel
KHK.-N. Hu
K.-N. Hu
CJC.-G. Joo
C.-G. Joo
RGR. G. Griffin
R. G. Griffin

1 August 2006 in Journal of the American Chemical Society
Verified
Journal Article
Closed access
PWPatrick Van Der Wel
Patrick Van Der Wel
KHKan-Nian Hu
Kan-Nian Hu
JLJózef Lewandowski
Józef Lewandowski
RGRobert G. Griffin
Robert G. Griffin

9 February 2016 in Proceedings of the National Academy of Sciences
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Journal Article
Closed access
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CHCody Hoop
Cody Hoop
HLHsiang-Kai Lin
Hsiang-Kai Lin
KKKarunakar Kar
Karunakar Kar
GMGábor Magyarfalvi
Gábor Magyarfalvi
JLJonathan M. Lamley
Jonathan M. Lamley
PWPatrick Van Der Wel
Patrick Van Der Wel
Significance: Huntington’s disease is a devastating and incurable inherited neurodegenerative disease. Like at least eight other diseases, its primary genetic cause is the CAG repeat expansion in a specific gene. Mutant huntingtin protein undergoes misfolding and aggregation, causing degeneration of neurons through as-yet poorly understood mechanisms. Attempts to characterize the implicated protein deposits have until now had limited success. We present our structural studies of mutant huntingtin-derived protein deposits by advanced solid-state NMR spectroscopy. We determine the essential structural features of the fibrils’ rigid core, which is shown to feature intramolecular β-hairpins tied together via interdigitating extended side chains. These structural insights have direct implications for the mechanism by which the mutant protein misfolds and self-assembles.

7 March 2011 in Journal of the American Chemical Society
Verified
Journal Article
Open access
VSV. N. Sivanandam
V. N. Sivanandam
MJMurali Jayaraman
Murali Jayaraman
CHCody Hoop
Cody Hoop
RKRavindra Kodali
Ravindra Kodali
RWRonald Wetzel
Ronald Wetzel
PWPatrick Van Der Wel
Patrick Van Der Wel
The 17-residue N-terminus (httNT) directly flanking the polyQ sequence in huntingtin (htt) N-terminal fragments plays a crucial role in initiating and accelerating the aggregation process that is associated with Huntington’s disease pathogenesis. Here we report on magic-angle-spinning solid-state NMR studies of the amyloid-like aggregates of an htt N-terminal fragment. We find that the polyQ portion of this peptide exists in a rigid, dehydrated amyloid core that is structurally similar to simpler polyQ fibrils and may contain antiparallel β-sheets. In contrast, the httNT sequence in the aggregates is composed in part of a well-defined helix, which likely also exists in early oligomeric aggregates. Further NMR experiments demonstrate that the N-terminal helical segment displays increased dynamics and water exposure. Given its specific contribution to the initiation, rate, and mechanism of fibril formation, the helical nature of httNT and its apparent lack of effect on the polyQ fibril core structure seem surprising. The results provide new details about these disease-associated aggregates and also provide a clear example of an amino acid sequence that greatly enhances the rate of amyloid formation while itself not taking part in the amyloid structure. There is an interesting mechanistic analogy to recent reports pointing out the early-stage contributions of transient intermolecular helix−helix interactions in the aggregation behavior of various other amyloid fibrils.