The evolutionary events that have shaped biodiversity patterns in the African rainforests are still poorly documented. Past forest fragmentation and ecological gradients have been advocated as important drivers of genetic differentiation but their respective roles remain unclear. Using nuclear microsatellites (nSSRs) and chloroplast non-coding sequences (pDNA), we characterised the spatial genetic structure of Erythrophleum (Fabaceae) forest trees in West and Central Africa (Guinea Region, GR). This widespread genus displays a wide ecological amplitude and taxonomists recognize two forest tree species, E. ivorense and E. suaveolens, which are difficult to distinguish in the field and often confused.
In natural forests of Central Africa, several studies indicate a dramatic decrease in commercial trees, including species of concern for conservation. Enrichment planting with these species will favor both the long-term recovery of their populations and biodiversity conservation in logged forests. In this study, we analyzed the survival and growth of 23 species in plantations. Fourteen 0.2–1.1 ha mixed species plantations consisting of single-species 15 × 15 m blocks were studied for 5 years in a logging concession of southeastern Cameroon. The plantation design considered both species light requirements and sensitivity to damage by pests. To identify the best species for enrichment planting, we assessed both species performance and plantation costs. We also tested for relationships between species traits and species performance. Mean annual diameter growth increments ranged from 1.67 to 42.9 mm. No significant relationship was found between growth and survival. Herbivory by wild Bovidae was the main cause of mortality and should be carefully considered in rehabilitation efforts. We found a significant negative relationship between wood density and maximum growth rate. The other traits tested were not good predictors of species performance in plantations. The two best-performing species, Triplochiton scleroxylon and Terminalia superba, could reach the minimum cutting diameter during a 30-year cutting cycle. Costs were high and mechanized site preparation is suggested to reduce them. Widespread adoption of such plantations will only occur if financial incentives or national regulations for assuring regeneration are implemented.
1 March 2018 in Molecular Phylogenetics and Evolution
Species delimitation in closely related plant taxa can be challenging because (i) reproductive barriers are not always congruent with morphological differentiation, (ii) use of plastid sequences might lead to misinterpretation, (iii) rare species might not be sampled. We revisited molecular-based species delimitation in the African genus Milicia, currently divided into M. regia (West Africa) and M. excelsa (from West to East Africa). We used 435 samples collected in West, Central and East Africa. We genotyped SNP and SSR loci to identify genetic clusters, and sequenced two plastid regions (psbA-trnH, trnC-ycf6) and a nuclear gene (At103) to confirm species’ divergence and compare species delimitation methods. We also examined whether ecological niche differentiation was congruent with sampled genetic structure. West African M. regia, West African and East African M. excelsa samples constituted three well distinct genetic clusters according to SNPs and SSRs. In Central Africa, two genetic clusters were consistently inferred by both types of markers, while a few scattered samples, sympatric with the preceding clusters but exhibiting leaf traits of M. regia, were grouped with the West African M. regia cluster based on SNPs or formed a distinct cluster based on SSRs. SSR results were confirmed by sequence data from the nuclear region At103 which revealed three distinct ‘Fields For Recombination’ corresponding to (i) West African M. regia, (ii) Central African samples with leaf traits of M. regia, and (iii) all M. excelsa samples. None of the plastid sequences provide indication of distinct clades of the three species-like units. Niche modelling techniques yielded a significant correlation between niche overlap and genetic distance. Our genetic data suggest that three species of Milicia could be recognized. It is surprising that the occurrence of two species in Central Africa was not reported for this well-known timber tree. Globally, our work highlights the importance of collecting samples in a systematic way and the need for combining different nuclear markers when dealing with species complexes. Recognizing cryptic species is particularly crucial for economically exploited species because some hidden taxa might actually be endangered as they are merged with more abundant species.
1 February 2017 in Molecular Phylogenetics and Evolution