Beatriz Pacheco

Dr. Beatriz Pacheco

orcid

Research Focus & Metrics

Academic Career Length

28Years (1999-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2010 in Molecular Cell
Verified
Journal Article
Closed access
AFAndrés Finzi
Andrés Finzi
SXShi-Hua Xiang
Shi-Hua Xiang
BPBeatriz Pacheco
Beatriz Pacheco
LWLiping Wang
Liping Wang
JHJessica Haight
Jessica Haight
JSJoseph Sodroski
Joseph Sodroski

1 October 2014 in Current Opinion in Virology
Verified
Journal Article
Closed access
Luis Menéndez-AriasLuis Menéndez-Arias
Luis Menéndez-Arias
MÁMar Álvarez
Mar Álvarez
BPBeatriz Pacheco
Beatriz Pacheco

23 June 2011 in PLOS Pathogens
Verified
Journal Article
Open access
PDF file
HHHillel Haim
Hillel Haim
BSBettina Strack
Bettina Strack
AKAemro Kassa
Aemro Kassa
NMNavid Madani
Navid Madani
LWLiping Wang
Liping Wang
JSJoseph Sodroski
Joseph Sodroski
Human immunodeficiency virus (HIV-1) enters cells following sequential activation of the high-potential-energy viral envelope glycoprotein trimer by target cell CD4 and coreceptor. HIV-1 variants differ in their requirements for CD4; viruses that can infect coreceptor-expressing cells that lack CD4 have been generated in the laboratory. These CD4-independent HIV-1 variants are sensitive to neutralization by multiple antibodies that recognize different envelope glycoprotein epitopes. The mechanisms underlying CD4 independence, global sensitivity to neutralization and the association between them are still unclear. By studying HIV-1 variants that differ in requirements for CD4, we investigated the contribution of CD4 binding to virus entry. CD4 engagement exposes the coreceptor-binding site and increases the “intrinsic reactivity” of the envelope glycoproteins; intrinsic reactivity describes the propensity of the envelope glycoproteins to negotiate transitions to lower-energy states upon stimulation. Coreceptor-binding site exposure and increased intrinsic reactivity promote formation/exposure of the HR1 coiled coil on the gp41 transmembrane glycoprotein and allow virus entry upon coreceptor binding. Intrinsic reactivity also dictates the global sensitivity of HIV-1 to perturbations such as exposure to cold and the binding of antibodies and small molecules. Accordingly, CD4 independence of HIV-1 was accompanied by increased susceptibility to inactivation by these factors. We investigated the role of intrinsic reactivity in determining the sensitivity of primary HIV-1 isolates to inhibition. Relative to the more common neutralization-resistant (“Tier 2-like”) viruses, globally sensitive (“Tier 1”) viruses exhibited increased intrinsic reactivity, i.e., were inactivated more efficiently by cold exposure or by a given level of antibody binding to the envelope glycoprotein trimer. Virus sensitivity to neutralization was dictated both by the efficiency of inhibitor/antibody binding to the envelope glycoprotein trimer and by envelope glycoprotein reactivity to the inhibitor/antibody binding event. Quantitative differences in intrinsic reactivity contribute to HIV-1 strain variability in global susceptibility to neutralization and explain the long-observed relationship between increased inhibitor sensitivity and decreased entry requirements for target cell CD4. Human immunodeficiency virus (HIV-1), the cause of acquired immunodeficiency syndrome (AIDS), enters cells by attaching its major surface component, the envelope glycoprotein spike, to a receptor protein on the target cell called CD4. This attachment promotes cell entry by allowing the envelope protein to bind a second receptor (the “coreceptor”) on the cell. In rare cases, the virus is pre-activated and can bind coreceptor and enter cells in the absence of CD4. Such viruses, which are rarely found in patients, are also very sensitive to inhibition by antibodies made by the host immune system. We describe here a new property of HIV-1 called “intrinsic reactivity” that regulates the level of both entry into cells and sensitivity to antibodies. Intrinsic reactivity dictates the level of responsiveness of the envelope protein to the binding of stimulatory (coreceptor) and inhibitory (antibody) agents. Increases in intrinsic reactivity also result in enhanced sensitivity to inactivation at cold temperatures, which serves as a quantitative surrogate for intrinsic reactivity. In human hosts, HIV-1 must regulate its intrinsic reactivity to balance the ability to enter cells expressing low levels of CD4 with the requirement to avoid the host antibody response.

1 October 2016 in EBioMedicine
Verified
Journal Article
Open access
JRJonathan Richard
Jonathan Richard
BPBeatriz Pacheco
Beatriz Pacheco
NGNeelakshi Gohain
Neelakshi Gohain
MVMaxime Veillette
Maxime Veillette
SDShilei Ding
Shilei Ding
AFAndrés Finzi
Andrés Finzi
Human immunodeficiency virus type 1 (HIV-1) has evolved a sophisticated strategy to conceal conserved epitopes of its envelope glycoproteins (Env) recognized by antibody-dependent cellular cytotoxicity (ADCC)-mediating antibodies. These antibodies, which are present in the sera of most HIV-1-infected individuals, preferentially recognize Env in its CD4-bound conformation. Accordingly, recent studies showed that small CD4-mimetics (CD4mc) able to "push" Env into this conformation sensitize HIV-1-infected cells to ADCC mediated by HIV+ sera. Here we test whether CD4mc also expose epitopes recognized by anti-cluster A monoclonal antibodies such as A32, thought to be responsible for the majority of ADCC activity present in HIV+ sera and linked to decreased HIV-1 transmission in the RV144 trial. We made the surprising observation that CD4mc are unable to enhance recognition of HIV-1-infected cells by this family of antibodies in the absence of antibodies such as 17b, which binds a highly conserved CD4-induced epitope overlapping the co-receptor binding site (CoRBS). Our results indicate that CD4mc initially open the trimeric Env enough to allow the binding of CoRBS antibodies but not anti-cluster A antibodies. CoRBS antibody binding further opens the trimeric Env, allowing anti-cluster A antibody interaction and sensitization of infected cells to ADCC. Therefore, ADCC responses mediated by cluster A antibodies in HIV-positive sera involve a sequential opening of the Env trimer on the surface of HIV-1-infected cells. The understanding of the conformational changes required to expose these vulnerable Env epitopes might be important in the design of new strategies aimed at fighting HIV-1.

1 April 2010 in Journal of Virology
Verified
Journal Article
Closed access
SXShi-Hua Xiang
Shi-Hua Xiang
AFAndrés Finzi
Andrés Finzi
BPBeatriz Pacheco
Beatriz Pacheco
KAKevin Alexander
Kevin Alexander
WYWen Yuan
Wen Yuan
JSJoseph Sodroski
Joseph Sodroski
Human immunodeficiency virus (HIV-1) entry into cells is mediated by a trimeric complex consisting of noncovalently associated gp120 (exterior) and gp41 (transmembrane) envelope glycoproteins. The binding of gp120 to receptors on the target cell alters the gp120-gp41 relationship and activates the membrane-fusing capacity of gp41. Interaction of gp120 with the primary receptor, CD4, results in the exposure of the gp120 third variable (V3) loop, which contributes to binding the CCR5 or CXCR4 chemokine receptors. We show here that insertions in the V3 stem or polar substitutions in a conserved hydrophobic patch near the V3 tip result in decreased gp120-gp41 association (in the unliganded state) and decreased chemokine receptor binding (in the CD4-bound state). Subunit association and syncytium-forming ability of the envelope glycoproteins from primary HIV-1 isolates were disrupted more by V3 changes than those of laboratory-adapted HIV-1 envelope glycoproteins. Changes in the gp120 beta2, beta19, beta20, and beta21 strands, which evidence suggests are proximal to the V3 loop in unliganded gp120, also resulted in decreased gp120-gp41 association. Thus, a gp120 element composed of the V3 loop and adjacent beta strands contributes to quaternary interactions that stabilize the unliganded trimer. CD4 binding dismantles this element, altering the gp120-gp41 relationship and rendering the hydrophobic patch in the V3 tip available for chemokine receptor binding.

1 April 2019 in Virus Research
Verified
Journal Article
Closed access
MGMoisés García-Serradilla
Moisés García-Serradilla
Cristina RiscoCristina Risco
Cristina Risco
BPBeatriz Pacheco
Beatriz Pacheco