Deng Jiabin

Dr. Deng Jiabin


Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 December 2017 in Journal of Ethnobiology and Ethnomedicine
Verified
Journal Article
Open access
PDF file
KAKhawaja Shafique Ahmad
Khawaja Shafique Ahmad
AHAbdul Hamid
Abdul Hamid
Fahim NawazFahim Nawaz
Fahim Nawaz
MHMansoor Hameed
Mansoor Hameed
FAFarooq Ahmad Ahmad
Farooq Ahmad Ahmad
SMSehrish Mahroof
Sehrish Mahroof
This explorative study was undertaken for the first time in Kel village located in the Upper Neelum Valley, Azad Kashmir, Pakistan. The purpose was to document the indigenous knowledge of the native people used in the preparation of herbal medicines. To get the data on traditional uses of medicinal plants, 20 informants were interviewed. Quantitative ethnobotanical indices, i.e., use value (UV), relative frequencies of citation (RFC), informant consensus factor (Fic), fidelity level (FL), data matrix ranking (DMR), preference ranking (PR), and jaccard index (JI), were calculated for the recorded medicinal plants. A total of 50 medicinal plants belonging to 33 families used in 13 disease categories were documented. Leaves were the frequently used plant parts, and decoction was the commonly used method for herbal medicine. Plants with high use value were Berberis lycium (2.05), Impatiens glandulifera (1.95), Artemisia scoparia (1.75), Ageratum conozoides (1.75), and Achillea millefolium (1.7). The highest RFC value was calculated for Berberis lycium (0.75), Cynoglossum lanceolatum (0.65), and Impatiens glandulifera and Achillea millefolium (0.60 each). The maximum informant consensus factor was for urinary system, cardiac diseases, baldness, and abortion and miscarriage (1.00). Berberis lyceum (95%) used in jaundice, hepatitis, typhoid, fever, and tuberculosis disorders. Plants with maximum fidelity level (FL) were Berberis lycium (95%) followed by Dioscorea bulbifera, Impatiens glandulifera, and Artemisia vulgaris (90%). Olea ferruginea was the most multipurpose plant and exports (21.2%) was the leading threat in the area. The pearson correlation coefficient (0.500) showed a positive correlation between the use value and relative frequency of citation. The present study provides useful information about traditional uses of medicinal plants used by local communities in different ailments. The plants with the highest use values could be employed in pharmacological research and biotechnological approaches in order to achieve adequate revenue. Some of the plants in the study area are facing high threats of becoming rare, and conservation initiatives are needed to conserve them for sustainable management in the region.

1 February 2015 in Molecular Phylogenetics and Evolution
Verified
Journal Article
Closed access
DJDeng Jiabin
Deng Jiabin
BDBryan T. Drew
Bryan T. Drew
EMEvgeny V Mavrodiev
Evgeny V Mavrodiev
MGMatthew Gitzendanner
Matthew Gitzendanner
PSPamela S. Soltis
Pamela S. Soltis
DSDouglas E. Soltis
Douglas E. Soltis

10 February 2022 in Forests
Verified
Journal Article
Open access
PDF file
HLHeng Liang
Heng Liang
DJDeng Jiabin
Deng Jiabin
GGGang Gao
Gang Gao
Chunbang DingChunbang Ding
Chunbang Ding
LZLi Zhang
Li Zhang
RYRuiwu Yang
Ruiwu Yang
Curcuma is of high economic value, credited to its medicinal, edible, and ornamental properties, which possess all signatures of adaptability, and rapid radiation, especially species of Curcuma (Chinese Curcuma, a recent Qinghai–Tibetan Plateau diversification genera) scattered in China. However, little is known about the incongruent phylogenetic signals within this genera from different inheritance patterns that will militate against the further development of this genera. In this research, we applied complete chloroplast genome data together with double-digest restriction site-associated DNA sequencing data (ddRAD-seq) strategy to investigate phylogenetic signals of Chinese Curcuma species, clustering using two RAD analysis pipelines (STACKS and pyRAD). Phylogenetic trees were obtained from each locus based on the maximum likelihood (ML) and multispecies coalescent (BEAST) methods. For visual comparison, multi-method and different datasets were used to infer the phylogeny. We discovered inconsistent relationships for the Chinese Curcuma with varying degrees of support using different methods and datasets.

2 January 2021 in Mitochondrial DNA Part B
Verified
Journal Article
Open access
DJDeng Jiabin
Deng Jiabin
HLHeng Liang
Heng Liang
XLXuqiang Luo
Xuqiang Luo
WZWei Zhang
Wei Zhang
GGGang Gao
Gang Gao
GZGuiling Zhang
Guiling Zhang
Nardostachys jatamans is an endemic herb in China, distributes mainly in Southeast Gansu, South Qinghai and West Sichuan of Qinghai-Tibet Plateau. In this study, the complete chloroplast genome (a typical quadripartite structure) sequence of N. jatamans was reported. The length of the DNA molecule was 155,268 bp with a large single-copy region (LSC: 87,263 bp), small single-copy region (SSC: 17,327 bp) and inverted repeats (IRa and IRb: 25,339 bp). The overall GC content was 38.56%. It has a total of 129 genes, containing 83 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The phylogenetic analysis has shown that N. jatamans is sister to Valeriana offcinalis. The chloroplast genome provides the basis for development and utilization of N. jatamans in future.

1 June 2016 in Biochemical Systematics and Ecology
Verified
Journal Article
Closed access
DJDeng Jiabin
Deng Jiabin
GGGang Gao
Gang Gao
YZYan Zhang
Yan Zhang
FHFengmei He
Fengmei He
XLXuqiang Luo
Xuqiang Luo
RYRuiwu Yang
Ruiwu Yang

5 December 2014 in bioRxiv
Verified
Preprint
Open access
PDF file
CHCody Hinchliff
Cody Hinchliff
SSStephen A Smith
Stephen A Smith
JAJames F Allman
James F Allman
JBJ Gordon Burleigh
J Gordon Burleigh
RCRuchi Chaudhary
Ruchi Chaudhary
KCKaren Ann Cranston
Karen Ann Cranston
Reconstructing the phylogenetic relationships that unite all lineages (the tree of life) is a grand challenge. The paucity of homologous character data across disparately related lineages currently renders direct phylogenetic inference untenable. To reconstruct a comprehensive tree of life we therefore synthesized published phylogenies, together with taxonomic classifications for taxa never incorporated into a phylogeny. We present a draft tree containing 2.3 million tips -- the Open Tree of Life. Realization of this tree required the assembly of two additional community resources: 1) a novel comprehensive global reference taxonomy; and 2) a database of published phylogenetic trees mapped to this taxonomy. Our open source framework facilitates community comment and contribution, enabling the tree to be continuously updated when new phylogenetic and taxonomic data become digitally available. While data coverage and phylogenetic conflict across the Open Tree of Life illuminate gaps in both the underlying data available for phylogenetic reconstruction and the publication of trees as digital objects, the tree provides a compelling starting point for community contribution. This comprehensive tree will fuel fundamental research on the nature of biological diversity, ultimately providing up-to-date phylogenies for downstream applications in comparative biology, ecology, conservation biology, climate change, agriculture, and genomics.