Aparna Banerjee

Dr. Aparna Banerjee

Universidad Católica del Maule
orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 June 2020 in Environmental Chemistry Letters
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Journal Article
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SSShrabana Sarkar
Shrabana Sarkar
NPNidia Torres Ponce
Nidia Torres Ponce
Aparna BanerjeeAparna Banerjee
Aparna Banerjee
RBRajib Bandopadhyay
Rajib Bandopadhyay
Rajendran SaravananRajendran Saravanan
Rajendran Saravanan
Eric LichtfouseEric Lichtfouse
Eric Lichtfouse

1 June 2016 in International Journal of Biological Macromolecules
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Journal Article
Closed access
Aparna BanerjeeAparna Banerjee
Aparna Banerjee
RBRajib Bandopadhyay
Rajib Bandopadhyay

19 August 2021 in Frontiers in Microbiology
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Journal Article
Open access
Aparna BanerjeeAparna Banerjee
Aparna Banerjee
SSShrabana Sarkar
Shrabana Sarkar
TGTanvi Govil
Tanvi Govil
PGPatricio González-Faune
Patricio González-Faune
Gustavo Cabrera-BarjasGustavo Cabrera-Barjas
Gustavo Cabrera-Barjas
RAJESH K SANIRAJESH K SANI
RAJESH K SANI
Various microorganisms thrive under extreme environments, like hot springs, hydrothermal vents, deep marine ecosystems, hyperacid lakes, acid mine drainage, high UV exposure, and more. To survive against the deleterious effect of these extreme circumstances, they form a network of biofilm where exopolysaccharides (EPSs) comprise a substantial part. The EPSs are often polyanionic due to different functional groups in their structural backbone, including uronic acids, sulfated units, and phosphate groups. Altogether, these chemical groups provide EPSs with a negative charge allowing them to (a) act as ligands toward dissolved cations as well as trace, and toxic metals; (b) be tolerant to the presence of salts, surfactants, and alpha-hydroxyl acids; and (c) interface the solubilization of hydrocarbons. Owing to their unique structural and functional characteristics, EPSs are anticipated to be utilized industrially to remediation of metals, crude oil, and hydrocarbons from contaminated wastewaters, mines, and oil spills. The biotechnological advantages of extremophilic EPSs are more diverse than traditional biopolymers. The present review aims at discussing the mechanisms and strategies for using EPSs from extremophiles in industries and environment bioremediation. Additionally, the potential of EPSs as fascinating biomaterials to mediate biogenic nanoparticles synthesis and treat multicomponent water contaminants is discussed.

15 June 2022 in Biomolecules
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Aparna BanerjeeAparna Banerjee
Aparna Banerjee
SBSura Jasem Mohammad Mohammed Breig
Sura Jasem Mohammad Mohammed Breig
AGAleydis Gómez
Aleydis Gómez
ISIgnacio Sánchez-Arévalo
Ignacio Sánchez-Arévalo
Patricio González FaunePatricio González Faune
Patricio González Faune
Gustavo Cabrera-BarjasGustavo Cabrera-Barjas
Gustavo Cabrera-Barjas
Extremophilic microorganisms often produce novel bioactive compounds to survive under harsh environmental conditions. Exopolysaccharides (EPSs), a constitutive part of bacterial biofilm, are functional biopolymers that act as a protecting sheath to the extremophilic bacteria and are of high industrial value. In this study, we elucidate a new EPS produced by thermophilic Bacillus haynesii CamB6 from a slightly acidic (pH 5.82) Campanario hot spring (56.4 °C) located in the Central Andean Mountains of Chile. Physicochemical properties of the EPS were characterized by different techniques: Scanning electron microscopy- energy dispersive X-ray spectroscopy (SEM-EDS), Atomic Force Microscopy (AFM), High-Performance Liquid Chromatography (HPLC), Gel permeation chromatography (GPC), Fourier Transform Infrared Spectroscopy (FTIR), 1D and 2D Nuclear Magnetic Resonance (NMR), and Thermogravimetric analysis (TGA). The EPS demonstrated amorphous surface roughness composed of evenly distributed macromolecular lumps. GPC and HPLC analysis showed that the EPS is a low molecular weight heteropolymer composed of mannose (66%), glucose (20%), and galactose (14%). FTIR analysis demonstrated the polysaccharide nature (–OH groups, Acetyl groups, and pyranosic ring structure) and the presence of different glycosidic linkages among sugar residues, which was further confirmed by NMR spectroscopic analyses. Moreover, D-mannose α-(1→2) and α-(1→4) linkages prevail in the CamB6 EPS structure. TGA revealed the high thermal stability (240 °C) of the polysaccharide. The functional properties of the EPS were evaluated for food industry applications, specifically as an antioxidant and for its emulsification, water-holding (WHC), oil-holding (OHC), and flocculation capacities. The results suggest that the study EPS can be a useful additive for the food-processing industry.

1 January 2020 in Electronic Journal of Biotechnology
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Journal Article
Open access
SSShrabana Sarkar
Shrabana Sarkar
Aparna BanerjeeAparna Banerjee
Aparna Banerjee
NCNibedita Chakraborty
Nibedita Chakraborty
KSKaruna Soren
Karuna Soren
PCPriyanka Chakraborty
Priyanka Chakraborty
RBRajib Bandopadhyay
Rajib Bandopadhyay

1 December 2018 in Journal of Genetic Engineering and Biotechnology
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Journal Article
Open access
BDBhramar Dutta
Bhramar Dutta
Aparna BanerjeeAparna Banerjee
Aparna Banerjee
PCPriyanka Chakraborty
Priyanka Chakraborty
RBRajib Bandopadhyay
Rajib Bandopadhyay
Xylans are the second most abundant form of hemicelluloses and are the second most abundant polysaccharide in nature after cellulose. To degrade xylan, microbes produce mainly xylanase enzyme. Wide range of microorganisms like fungi, bacteria, yeast, marine algae etc. are capable of producing xylanase. Main source of xylanase is fungi but industrial production of bacterial xylanase is low cost, easy downstream process and high production rate. To understand primary, secondary and tertiary structure of xylanase, in silico composition of amino acids, basic physiological characteristics; viz., pI, molecular weight, instability index, GRAVY, molar extinction coefficient, secondary structure, presence of functional domain and motifs, phylogenetic tree, salt bridge compositions are determined. In silico study of xylanase focused on 36 different bacterial sources are performed by retrieving FASTA and PDB sequences using RCSB PDB. FASTA and PDB files are proceed further in ExPASy-ProtParam, RAMPAGE, QMEAN, MEME, PSIPRED, InterProScan, MOTIF scan, ERRAT, Peptide cutter, ESBRI and MEGA 7. The instability index range (16.90-38.78) clearly indicates that the protein is highly stable. α-helix mean value (27.11%) infers the protein is dominated by α-helix region. The aliphatic index (39.80-90.68) gives information that the protein is highly thermostable, prevalence by alanine amino acid in aliphatic side chain. No transmembrane domain was found in the protein which confirms the enzyme is extracellular in nature. Ancestor chart analysis confirmed that it is a part of carbohydrate metabolic process and more specifically a member of glycoside hydrolase super family.