Mateja Germ

Prof. Mateja Germ

University of Ljubljana, Ljubljana, Slovenia
orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 January 2021 in Genome Biology
Verified
Journal Article
Open access
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KZKai Xuan Zhang
Kai Xuan Zhang
Ming HeMing He
Ming He
YFYu Fan
Yu Fan
HZHui Zhao
Hui Zhao
高斌高 斌
高 斌
MZMeiliang Zhou
Meiliang Zhou
Background: Tartary buckwheat (Fagopyrum tataricum) is a nutritionally balanced and flavonoid-rich crop plant that has been in cultivation for 4000 years and is now grown globally. Despite its nutraceutical and agricultural value, the characterization of its genetics and its domestication history is limited.Results: Here, we report a comprehensive database of Tartary buckwheat genomic variation based on whole-genome resequencing of 510 germplasms. Our analysis suggests that two independent domestication events occurred in southwestern and northern China, resulting in diverse characteristics of modern Tartary buckwheat varieties. Genome-wide association studies for important agricultural traits identify several candidate genes, includingFtUFGT3andFtAP2YT1that significantly correlate with flavonoid accumulation and grain weight, respectively.Conclusions: We describe the domestication history of Tartary buckwheat and provide a detailed resource of genomic variation to allow for genomic-assisted breeding in the improvement of elite cultivars.

5 April 2021 in Plants
Verified
Journal Article
Open access
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ZLZlata Luthar
Zlata Luthar
AGAleksandra Golob
Aleksandra Golob
Mateja GermMateja Germ
Mateja Germ
BVBlanka Vombergar
Blanka Vombergar
Ivan KreftIvan Kreft
Ivan Kreft
Tartary buckwheat (Fagopyrum tataricum Gaertn.) originates in mountain areas of western China, and it is mainly cultivated in China, Bhutan, northern India, Nepal, and central Europe. Tartary buckwheat shows greater cold resistance than common buckwheat, and has traits for drought tolerance. Buckwheat can provide health benefits due to its contents of resistant starch, mineral elements, proteins, and in particular, phenolic substances, which prevent the effects of several chronic human diseases, including hypertension, obesity, cardiovascular diseases, and gallstone formation. The contents of the flavonoids rutin and quercetin are very variable among Tartary buckwheat samples from different origins and parts of the plants. Quercetin is formed after the degradation of rutin by the Tartary buckwheat enzyme rutinosidase, which mainly occurs after grain milling during mixing of the flour with water. High temperature treatments of wet Tartary buckwheat material prevent the conversion of rutin to quercetin.

1 March 2024 in Journal of Vegetation Science
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Journal Article
Open access
IKIlona Knollová
Ilona Knollová
MCMilan Chytrý
Milan Chytrý
HBHelge Bruelheide
Helge Bruelheide
SDStefan Dullinger
Stefan Dullinger
UJUte Jandt
Ute Jandt
FEFranz Essl
Franz Essl
Aims: We introduce ReSurveyEurope — a new data source of resurveyed vegetation plots in Europe, compiled by a collaborative network of vegetation scientists. We describe the scope of this initiative, provide an overview of currently available data, governance, data contribution rules, and accessibility. In addition, we outline further steps, including potential research questions.Results: ReSurveyEurope includes resurveyed vegetation plots from all habitats. Version 1.0 of ReSurveyEurope contains 283,135 observations (i.e., individual surveys of each plot) from 79,190 plots sampled in 449 independent resurvey projects. Of these, 62,139 (78%) are permanent plots, that is, marked in situ, or located with GPS, which allow for high spatial accuracy in resurvey. The remaining 17,051 (22%) plots are from studies in which plots from the initial survey could not be exactly relocated. Four data sets, which together account for 28,470 (36%) plots, provide only presence/absence information on plant species, while the remaining 50,720 (64%) plots contain abundance information (e.g., percentage cover or cover–abundance classes such as variants of the Braun‐Blanquet scale). The oldest plots were sampled in 1911 in the Swiss Alps, while most plots were sampled between 1950 and 2020.Conclusions: ReSurveyEurope is a new resource to address a wide range of research questions on fine‐scale changes in European vegetation. The initiative is devoted to an inclusive and transparent governance and data usage approach, based on slightly adapted rules of the well‐established European Vegetation Archive (EVA). ReSurveyEurope data are ready for use, and proposals for analyses of the data set can be submitted at any time to the coordinators. Still, further data contributions are highly welcome.

1 May 2020 in Plant Physiology and Biochemistry
Verified
Journal Article
Closed access
AGAleksandra Golob
Aleksandra Golob
TNTjaša Novak
Tjaša Novak
NMNina Kacjan Maršić
Nina Kacjan Maršić
HŠHelena Šircelj
Helena Šircelj
VSVekoslava Stibilj
Vekoslava Stibilj
Mateja GermMateja Germ
Mateja Germ

24 November 2020 in Plants
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Journal Article
Open access
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ZLZlata Luthar
Zlata Luthar
Mateja GermMateja Germ
Mateja Germ
MLMatevz Likar
Matevz Likar
AGAleksandra Golob
Aleksandra Golob
Katarina Vogel-MikušKatarina Vogel-Mikuš
Katarina Vogel-Mikuš
Ivan KreftIvan Kreft
Ivan Kreft
Common buckwheat (Fagopyrum esculentum Moench) and Tartary buckwheat (Fagopyrum tataricum (L.) Gaertn.) are sources of many bioactive compounds, such as rutin, quercetin, emodin, fagopyrin and other (poly)phenolics. In damaged or milled grain under wet conditions, most of the rutin in common and Tartary buckwheat is degraded to quercetin by rutin-degrading enzymes (e.g., rutinosidase). From Tartary buckwheat varieties with low rutinosidase activity it is possible to prepare foods with high levels of rutin, with the preserved initial levels in the grain. The quercetin from rutin degradation in Tartary buckwheat grain is responsible in part for inhibition of α-glucosidase in the intestine, which helps to maintain normal glucose levels in the blood. Rutin and emodin have the potential for antiviral effects. Grain embryos are rich in rutin, so breeding buckwheat with the aim of producing larger embryos may be a promising strategy to increase the levels of rutin in common and Tartary buckwheat grain, and hence to improve its nutritional value.

28 December 2021 in Plants
Verified
Journal Article
Open access
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AČAnja Mavrič Čermelj
Anja Mavrič Čermelj
AGAleksandra Golob
Aleksandra Golob
Katarina Vogel-MikušKatarina Vogel-Mikuš
Katarina Vogel-Mikuš
Mateja GermMateja Germ
Mateja Germ
Due to climate change, plants are being more adversely affected by heatwaves, floods, droughts, and increased temperatures and UV radiation. This review focuses on enhanced UV-B radiation and drought, and mitigation of their adverse effects through silicon addition. Studies on UV-B stress and addition of silicon or silicon nanoparticles have been reported for crop plants including rice, wheat, and soybean. These have shown that addition of silicon to plants under UV-B radiation stress increases the contents of chlorophyll, soluble sugars, anthocyanins, flavonoids, and UV-absorbing and antioxidant compounds. Silicon also affects photosynthesis rate, proline content, metal toxicity, and lipid peroxidation. Drought is a stress factor that affects normal plant growth and development. It has been frequently reported that silicon can reduce stress caused by different abiotic factors, including drought. For example, under drought stress, silicon increases ascorbate peroxidase activity, total soluble sugars content, relative water content, and photosynthetic rate. Silicon also decreases peroxidase, catalase, and superoxide dismutase activities, and malondialdehyde content. The effects of silicon on drought and concurrently UV-B stressed plants has not yet been studied in detail, but initial studies show some stress mitigation by silicon.