HUI CHEN

HUI CHEN


Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Verified
Journal Article
Open access
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YHYifan He
Yifan He
QSQianqian Song
Qianqian Song
YWYuefeng Wu
Yuefeng Wu
SYShutao Ye
Shutao Ye
SCShipin Chen
Shipin Chen
HCHUI CHEN
HUI CHEN
Camellia oleifera is a valuable woody oil plant belonging to the Theaceae, Camellia oil extracted from the seed is an excellent edible oil source. Self-incompatibility (SI) in C. oleifera results in low fruit set, and our knowledge about the mechanism remains limited. In the present study, the Tandem mass tag (TMT) based quantitative proteomics was employed to analyze the dynamic change of proteins response to self- and cross-pollinated in C. oleifera. A total of 6,616 quantified proteins were detected, and differentially abundant proteins (DAPs) analysis identified a large number of proteins. Combined analysis of differentially expressed genes (DEGs) and DAPs of self- and cross-pollinated pistils based on transcriptome and proteome data revealed that several candidate genes or proteins involved in SI of C. oleifera, including polygalacturonase inhibitor, UDP-glycosyltransferase 92A1-like, beta-D-galactosidase, S-adenosylmethionine synthetase, xyloglucan endotransglucosylase/hydrolase, ABC transporter G family member 36-like, and flavonol synthase. Venn diagram analysis identified 11 proteins that may participate in pollen tube growth in C. oleifera. Our data also revealed that the abundance of proteins related to peroxisome was altered in responses to SI in C. oleifera. Moreover, the pathway of lipid metabolism-related, flavonoid biosynthesis and splicesome were reduced in self-pollinated pistils by the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. In summary, the results of the present study lay the foundation for learning the regulatory mechanism underlying SI responses as well as provides valuable protein resources for the construction of self-compatibility C. oleifera through genetic engineering in the future.

26 December 2021 in Microorganisms
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Journal Article
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YCYuanyuan Cheng
Yuanyuan Cheng
LZLexin Zhou
Lexin Zhou
TLTian Liang
Tian Liang
JMJiayin Man
Jiayin Man
YWYinghao Wang
Yinghao Wang
TZTaoxiang Zhang
Taoxiang Zhang
Based on the importance and sensitivity of microbial communities to changes in the forest ecosystem, soil microorganisms can be used to indicate the health of the forest system. The metagenome sequencing was used to analyze the changes of microbial communities between natural and plantation Castanea henryi forests for understanding the effect of forest types on soil microbial communities. Our result showed the soil microbial diversity and richness were higher in the natural forests than in the plantation. Proteobacteria, Actinobacteria, and Acidobacteria are the dominant categories in the C. henryi rhizosphere, and Proteobacteria and Actinobacteria were significantly enriched in the natural forest while Acidobacteria was significantly enriched in the plantation. Meanwhile, the functional gene diversity and the abundance of functions in the natural forest were higher than that of the plantation. Furthermore, we found that the microbial network in the natural forests had more complex than in the plantation. We also emphasized the low-abundance taxa may play an important role in the network structure. These results clearly showed that microbial communities, in response to different forest types, provide valuable information to manipulate microbiomes to improve soil conditions of plantation.

22 September 2020 in Agronomy
Verified
Journal Article
Open access
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QSQianqian Song
Qianqian Song
YHYifan He
Yifan He
YWYuefeng Wu
Yuefeng Wu
SCShipin Chen
Shipin Chen
TZTaoxiang Zhang
Taoxiang Zhang
HCHUI CHEN
HUI CHEN
Nowadays, biochar is increasingly used widely as an important soil amendment to enhance soil nutrients availability. Therefore, we investigated the effect of C.oleifera shell biochar (CSB) on C.oleifera plantation soils to provide evidence that C. oleifera shell as a raw material in biochar has great potential to be a soil amendment. For this, a short-term incubation experiment was conducted in controlled conditions to evaluate the effects of CSB application on two soil chemical properties, microbial biomass, and enzymatic activity. We compared two acidic soils, mixed with CSB of three pyrolysis temperatures (300, 500, and 700 °C), and two application rates (3% and 5% (w/w)), incubated for 180 days. The results showed that the soil pH, total P (TP), and available P (AP) significantly increased under 5CSB700 in two soils, and indicated CSB application rate and pyrolysis temperature had a significant impact on soil pH, TP, and AP (p < 0.05). CSB application also significantly increased the total inorganic P in two soils and presented a significantly positive correlation with soil pH, TP, and AP under redundancy analysis. The results suggested that CSB application has a variable effect on soil enzymatic activity, microbial biomass C (MBC), and microbial biomass P (MBP) on average, while it increased the soil microbial biomass N (MBN) in both soils. We concluded that CSB could be a soil amendment to increase soil nutrients of C.oleifera plantation soils. Before the application of biochar to C.oleifera plantation forest soils, long-term studies are required to assess the effects of biochar under field conditions and its promoting effect on the growth of C. oleifera.

11 January 2020 in Forests
Verified
Journal Article
Open access
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QSQianqian Song
Qianqian Song
SCShipin Chen
Shipin Chen
YWYuefeng Wu
Yuefeng Wu
YHYifan He
Yifan He
JFJinling Feng
Jinling Feng
HCHUI CHEN
HUI CHEN
Camellia oleifera Abel. is a critical oil tree species. Camellia oil, which is extracted from the seeds, is widely regarded as a premium cooking oil, with the content of oleic acid being over 80%. Light is thought to be one of the largest essential natural components in the regulation of plant developmental processes, and different light qualities can considerably influence plant physiological and phenotypic traits. In this research, we examined the growth and physiological responses of C. oleifera “MIN 43” cultivar plantlets to three different wavelengths of light, containing white, red, and blue light, and we utilized the combination of the PacBio single-molecule real-time (SMRT) and Illumina HiSeq RNA sequencing to obtain the mRNA expression profiles. The results showed that plantlets growing under blue light conditions displayed superior growth performance, including stimulated enhancement of the leaf area, increased leaf number, increased chlorophyll synthesis, and improved photosynthesis. Furthermore, SMAT sequencing created 429,955 reads of inserts, where 406,722 of them were full-length non-chimeric reads, and 131,357 non-redundant isoforms were produced. Abundant differentially expressed genes were found in leaves under different light qualities by RNA-sequencing. Gene expression profiles of actin, dynein, tubulin, defectively organized tributaries 3 (DOT3), and ADP ribosylation factor 5 (ARF5) were associated with the greatest leaf performance occurring under blue light conditions. Moreover, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis identified hundreds of pathways involved in different light conditions. The pathways of the plant circadian rhythm and hormone signal transduction were associated with different light quality responses in C. oleifera. Phytochrome B (PHYB), constitutively photomorphogenic 1 (COP1), long hypocotyl 5 (HY5), auxin/indole-3-acetic acid (AUX/IAA), Gretchen Hagen 3 (GH3), and small auxin-up RNA (SAUR), which were differentially expressed genes involved in these two pathways, play a vital role in responses to different wavelengths of light in C. oleifera. In addition, blue light significantly promotes flavonoid biosynthesis via changing expression of related genes.

20 January 2023 in Forests
Verified
Journal Article
Open access
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ZYZhijian Yang
Zhijian Yang
HCHUI CHEN
HUI CHEN
CLChaimei Lin
Chaimei Lin
JSJin-dian Sun
Jin-dian Sun
WWWenling Wen
Wenling Wen
JFJinling Feng
Jinling Feng
Hovenia acerba is a precious medicinal and edible tree. We assessed the genetic variation of H. acerba quality traits and conducted a comprehensive germplasm resource evaluation to provide a theoretical basis for breeding edible, medicinal, and edible/medicine combination varieties. We evaluated 31 H. acerba germplasm resources, including 12 infructescence and 8 fruit quality traits using correlation, principal component, and cluster analyses. The results showed that there were significant differences in all quality traits, with an average coefficient of variation greater than 0.20, an average genetic diversity greater than 1.80, and an average repeatability greater than 0.90. The average genetic variation and repeatability of quality traits in infructescence were higher than fruit. Infructescence K, Ca, Mn, Mg, and reducing sugar contents are important indicators in evaluating infructescence and fruit quality traits, and infructescence K, Mg, and reducing sugar contents are also quality innovation indices of H. acerba germplasms. Tannin, protein, and soluble sugar were the most suitable quality components for screening, followed by reducing sugar, starch, fat, total saponins, and total flavones. According to principal component factor scores and cluster analysis results, specific genotypes were selected as breeding materials for infructescence protein, tannin, flavone, reductive sugar, fruit tannin, fat, flavonoid, saponin, protein, and starch. The correlation analysis with environmental factors showed that the total amount of applied water could influence H. acerba infructescence and fruit quality. In conclusion, the variability of H. acerba germplasm resources was rich, and selection potential is large, which is beneficial to germplasm quality innovation and breeding.

2 July 2020 in Mitochondrial DNA Part B
Verified
Journal Article
Open access
WXWei-Wei Xie
Wei-Wei Xie
LSLiang-Jing Sheng
Liang-Jing Sheng
YWYi Wan
Yi Wan
XWXiao-Qian Weng
Xiao-Qian Weng
GLGuang-Hong Liang
Guang-Hong Liang
HCHUI CHEN
HUI CHEN
Plagiodera versicolora (Laicharting) is a leaf-eating pest widely distributed in the world. In this study, the first complete mitochondrial genome of P. Versicolora (Laicharting) was assembled and analyzed. The complete mitochondrial genome of P. Versicolora (Laicharting) is 16,857 bp with 22.39% GC containing, 13 protein-coding genes, 22 transfer RNA (tRNA), 2 ribosomal RNA (rRNA), as well as an AT-rich region. Phylogenomic analysis indicated that P. Versicolora (Laicharting) is sister to Chrysomela populiThis study provides useful information for the identification of this species and the study of genetic evolution with other species of Chrysomelidae.