Anthropogenic activities and industrial effluents are the major sources of petroleum hydrocarbon contamination in different environments. Microbe-based remediation techniques are known to be effective, inexpensive, and environmentally safe. In this review, the metabolic-target-specific pathway engineering processes used for improving the bioremediation of hydrocarbon-contaminated environments have been described. The microbiomes are characterised using environmental genomics approaches that can provide a means to determine the unique structural, functional, and metabolic pathways used by the microbial community for the degradation of contaminants. The bacterial metabolism of aromatic hydrocarbons has been explained via peripheral pathways by the catabolic actions of enzymes, such as dehydrogenases, hydrolases, oxygenases, and isomerases. We proposed that by using microbiome engineering techniques, specific pathways in an environment can be detected and manipulated as targets. Using the combination of metabolic engineering with synthetic biology, systemic biology, and evolutionary engineering approaches, highly efficient microbial strains may be utilised to facilitate the target-dependent bioprocessing and degradation of petroleum hydrocarbons. Moreover, the use of CRISPR-cas and genetic engineering methods for editing metabolic genes and modifying degradation pathways leads to the selection of recombinants that have improved degradation abilities. The idea of growing metabolically engineered microbial communities, which play a crucial role in breaking down a range of pollutants, has also been explained. However, the limitations of the in-situ implementation of genetically modified organisms pose a challenge that needs to be addressed in future research.

The urgent need to address environmental issues associated with the use of conventional fossil fuels has driven the rapid evolution of the global energy landscape. This review explores the background and significance of 3-G biofuel production, emphasizing the shift towards sustainable alternatives amidst escalating greenhouse gas emissions. While various renewable energy sources have gained prominence, biofuels have emerged as a promising solution for the transportation and industrial sectors, particularly from microalgal biomass. The rationale for focusing on microalgal biomass is based on its technical and environmental advantages. Unlike traditional feedstocks, microalgae boast a high lipid content, enhancing biofuel production efficiency. Their rapid growth rates and efficient carbon dioxide sequestration make microalgae frontrunners in scalable and sustainable biofuel production. This review aims to comprehensively analyze recent breakthroughs in 3-G biofuel production from microalgal biomass, filling gaps in the existing literature. The topics covered included species diversity, cultivation techniques, harvesting, pretreatment, lipid extraction methods, and biofuel production pathways. Genetic engineering, downstream processing, energy-efficient practices, and emerging trends, such as artificial intelligence and cross-disciplinary collaboration, will be explored. This study aims to consolidate recent research findings, identify challenges and opportunities, and guide future directions in microalgal biomass-based biofuel production. By synthesizing unpublished research, this review seeks to advance our knowledge and provide insights for researchers to foster sustainable and efficient 3-G biofuel production.