Alexandr Dejneka

Dr. Alexandr Dejneka

Institute of Physics of the Czech Academy of Sciences, Na Slovance 2, 18221, Prague, Czech Republic
orcid

Research Focus & Metrics

Academic Career Length

28Years (1999-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 November 2016 in Scientific Reports
Verified
Journal Article
Open access
VZVitalii Zablotskii
Vitalii Zablotskii
TPTatyana Polyakova
Tatyana Polyakova
Oleg LunovOleg Lunov
Oleg Lunov
Alexandr DejnekaAlexandr Dejneka
Alexandr Dejneka
The biological effects of high-gradient magnetic fields (HGMFs) have steadily gained the increased attention of researchers from different disciplines, such as cell biology, cell therapy, targeted stem cell delivery and nanomedicine. We present a theoretical framework towards a fundamental understanding of the effects of HGMFs on intracellular processes, highlighting new directions for the study of living cell machinery: changing the probability of ion-channel on/off switching events by membrane magneto-mechanical stress, suppression of cell growth by magnetic pressure, magnetically induced cell division and cell reprograming, and forced migration of membrane receptor proteins. By deriving a generalized form for the Nernst equation, we find that a relatively small magnetic field (approximately 1 T) with a large gradient (up to 1 GT/m) can significantly change the membrane potential of the cell and thus have a significant impact on not only the properties and biological functionality of cells but also cell fate.

1 March 2016 in Biomaterials
Verified
Journal Article
Closed access
Oleg LunovOleg Lunov
Oleg Lunov
VZVitalii Zablotskii
Vitalii Zablotskii
OCOlexander Churpita
Olexander Churpita
AJAles Jäger
Ales Jäger
LPLeoš Polívka
Leoš Polívka
SKSarka Kubinova
Sarka Kubinova

5 May 2021 in Frontiers in Medicine
Verified
Journal Article
Open access
SHSean Philip Harrison
Sean Philip Harrison
SBSaphira Felicitas Baumgarten
Saphira Felicitas Baumgarten
RVRajneesh Verma
Rajneesh Verma
Oleg LunovOleg Lunov
Oleg Lunov
Alexandr DejnekaAlexandr Dejneka
Alexandr Dejneka
Gareth SullivanGareth Sullivan
Gareth Sullivan
Liver cell types derived from induced pluripotent stem cells (iPSCs) share the potential to investigate development, toxicity, as well as genetic and infectious disease in ways currently limited by the availability of primary tissue. With the added advantage of patient specificity, which can play a role in all of these areas. Many iPSC differentiation protocols focus on 3 dimensional (3D) or organotypic differentiation, as these offer the advantage of more closely mimicking in vivo systems including; the formation of tissue like architecture and interactions/crosstalk between different cell types. Ultimately such models have the potential to be used clinically and either with or more aptly, in place of animal models. Along with the development of organotypic and micro-tissue models, there will be a need to co-develop imaging technologies to enable their visualization. A variety of liver models termed “organoids” have been reported in the literature ranging from simple spheres or cysts of a single cell type, usually hepatocytes, to those containing multiple cell types combined during the differentiation process such as hepatic stellate cells, endothelial cells, and mesenchymal cells, often leading to an improved hepatic phenotype. These allow specific functions or readouts to be examined such as drug metabolism, protein secretion or an improved phenotype, but because of their relative simplicity they lack the flexibility and general applicability of ex vivo tissue culture. In the liver field these are more often constructed rather than developed together organotypically as seen in other organoid models such as brain, kidney, lung and intestine. Having access to organotypic liver like surrogates containing multiple cell types with in vivo like interactions/architecture, would provide vastly improved models for disease, toxicity and drug development, combining disciplines such as microfluidic chip technology with organoids and ultimately paving the way to new therapies.

1 October 2021 in Journal of Hepatology
Verified
Journal Article
Open access
Jose Fernandez-ChecaJose Fernandez-Checa
Jose Fernandez-Checa
PBPierre Bagnaninchi
Pierre Bagnaninchi
HYHui Ye
Hui Ye
PSPau Sancho-Bru
Pau Sancho-Bru
JFJuan M. Falcon-Perez
Juan M. Falcon-Perez
LNLeonard Joseph Nelson
Leonard Joseph Nelson
Drug-induced liver injury (DILI) is a major cause of acute liver failure (ALF) and one of the leading indications for liver transplantation in Western societies. Given the wide use of both prescribed and over the counter drugs, DILI has become a major health issue for which there is a pressing need to find novel and effective therapies. Although significant progress has been made in understanding the molecular mechanisms underlying DILI, our incomplete knowledge of its pathogenesis and inability to predict DILI is largely due to both discordance between human and animal DILI in preclinical drug development and a lack of models that faithfully recapitulate complex pathophysiological features of human DILI. This is exemplified by the hepatotoxicity of acetaminophen (APAP) overdose, a major cause of ALF because of its extensive worldwide use as an analgesic. Despite intensive efforts utilising current animal and in vitro models, the mechanisms involved in the hepatotoxicity of APAP are still not fully understood. In this expert Consensus Statement, which is endorsed by the European Drug-Induced Liver Injury Network, we aim to facilitate and outline clinically impactful discoveries by detailing the requirements for more realistic human-based systems to assess hepatotoxicity and guide future drug safety testing. We present novel insights and discuss major players in APAP pathophysiology, and describe emerging in vitro and in vivo pre-clinical models, as well as advanced imaging and in silico technologies, which may improve prediction of clinical outcomes of DILI.

1 September 2023 in Experimental & Molecular Medicine
Verified
Journal Article
Open access
PDF file
SHSean P. Harrison
Sean P. Harrison
RSRichard Siller
Richard Siller
YTYoshiaki Tanaka
Yoshiaki Tanaka
MCMaria Eugenia Chollet
Maria Eugenia Chollet
MMMaría Eugenia de la Morena-Barrio
María Eugenia de la Morena-Barrio
GSGareth J. Sullivan
Gareth J. Sullivan
The lack of physiological parity between 2D cell culture and in vivo culture has led to the development of more organotypic models, such as organoids. Organoid models have been developed for a number of tissues, including the liver. Current organoid protocols are characterized by a reliance on extracellular matrices (ECMs), patterning in 2D culture, costly growth factors and a lack of cellular diversity, structure, and organization. Current hepatic organoid models are generally simplistic and composed of hepatocytes or cholangiocytes, rendering them less physiologically relevant compared to native tissue. We have developed an approach that does not require 2D patterning, is ECM independent, and employs small molecules to mimic embryonic liver development that produces large quantities of liver-like organoids. Using single-cell RNA sequencing and immunofluorescence, we demonstrate a liver-like cellular repertoire, a higher order cellular complexity, presenting with vascular luminal structures, and a population of resident macrophages: Kupffer cells. The organoids exhibit key liver functions, including drug metabolism, serum protein production, urea synthesis and coagulation factor production, with preserved post-translational modifications such as N-glycosylation and functionality. The organoids can be transplanted and maintained long term in mice producing human albumin. The organoids exhibit a complex cellular repertoire reflective of the organ and have de novo vascularization and liver-like function. These characteristics are a prerequisite for many applications from cellular therapy, tissue engineering, drug toxicity assessment, and disease modeling to basic developmental biology.

1 December 2020 in Journal of Controlled Release
Verified
Journal Article
Closed access
AFAdam Frtús
Adam Frtús
BSBarbora Smolková
Barbora Smolková
MUMariia Uzhytchak
Mariia Uzhytchak
MLMariia Lunova
Mariia Lunova
MJMilan Jirsa
Milan Jirsa
Oleg LunovOleg Lunov
Oleg Lunov