Eunhee Yi

Dr. Eunhee Yi

orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 August 2020 in Nature Genetics
Verified
Journal Article
Closed access
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HKHoon Kim
Hoon Kim
NNNam-Phuong Nguyen
Nam-Phuong Nguyen
KTKristen Turner
Kristen Turner
SWSihan Wu
Sihan Wu
AGAmit D. Gujar
Amit D. Gujar
RVRoel G. W. Verhaak
Roel G. W. Verhaak

1 May 2021 in Cancer Cell
Verified
Journal Article
Closed access
YZYanfen Zhu
Yanfen Zhu
AGAmit D. Gujar
Amit D. Gujar
CWChee-Hong Wong
Chee-Hong Wong
HTHarianto Tjong
Harianto Tjong
CNChew Yee Ngan
Chew Yee Ngan
CWChia-Lin Wei
Chia-Lin Wei

30 September 2021 in Nature Genetics
Verified
Journal Article
Closed access
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KJKevin C. Johnson
Kevin C. Johnson
KAKevin J. Anderson
Kevin J. Anderson
ECElise Courtois
Elise Courtois
AGAmit D. Gujar
Amit D. Gujar
FBFloris Barthel
Floris Barthel
RVRoel G. W. Verhaak
Roel G. W. Verhaak

24 November 2021 in Cancer Discovery
Verified
Journal Article
Open access
PDF file
EYEunhee Yi
Eunhee Yi
AGAmit D. Gujar
Amit D. Gujar
MGMolly Guthrie
Molly Guthrie
HKHoon Kim
Hoon Kim
DZDacheng Zhao
Dacheng Zhao
RVRoel G.W. Verhaak
Roel G.W. Verhaak
Oncogenic extrachromosomal DNA elements (ecDNA) play an important role in tumor evolution, but our understanding of ecDNA biology is limited. We determined the distribution of single-cell ecDNA copy number across patient tissues and cell line models and observed how cell-to-cell ecDNA frequency varies greatly. The exceptional intratumoral heterogeneity of ecDNA suggested ecDNA-specific replication and propagation mechanisms. To evaluate the transfer of ecDNA genetic material from parental to offspring cells during mitosis, we established the CRISPR-based ecTag method. ecTag leverages ecDNA-specific breakpoint sequences to tag ecDNA with fluorescent markers in living cells. Applying ecTag during mitosis revealed disjointed ecDNA inheritance patterns, enabling rapid ecDNA accumulation in individual cells. After mitosis, ecDNAs clustered into ecDNA hubs, and ecDNA hubs colocalized with RNA polymerase II, promoting transcription of cargo oncogenes. Our observations provide direct evidence for uneven segregation of ecDNA and shed new light on mechanisms through which ecDNAs contribute to oncogenesis. Significance: ecDNAs are vehicles for oncogene amplification. The circular nature of ecDNA affords unique properties, such as mobility and ecDNA-specific replication and segregation behavior. We uncovered fundamental ecDNA properties by tracking ecDNAs in live cells, highlighting uneven and random segregation and ecDNA hubs that drive cargo gene transcription. See related commentary by Henssen, p. 293. This article is highlighted in the In This Issue feature, p. 275

11 August 2022 in Nature Reviews Genetics
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Journal Article
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EYEunhee Yi
Eunhee Yi
RGRocío Chamorro González
Rocío Chamorro González
AHAnton G. Henssen
Anton G. Henssen
RVRoel G. W. Verhaak
Roel G. W. Verhaak

19 August 2025 in Cancers
Verified
Journal Article
Open access
PDF file
Trang NguyenTrang Nguyen
Trang Nguyen
HMHayk Mnatsakanyan
Hayk Mnatsakanyan
EYEunhee Yi
Eunhee Yi
CBChristian Badr
Christian Badr
Maximal safe surgical resection remains a critical component of glioblastoma (GBM) management, improving both survival and quality of life. However, complete tumor removal is hindered by the infiltrative nature of GBM and its proximity to eloquent brain regions. Fluorescence-guided surgery (FGS) has emerged as a valuable tool to enhance intraoperative tumor visualization and optimize resection outcomes. Currently used fluorophores such as 5-aminolevulinic acid (5-ALA), fluorescein sodium (FS), and indocyanine green (ICG) have distinct advantages but are limited by suboptimal specificity, shallow tissue penetration, and technical constraints. 5-ALA and SF often yield unreliable signals in low-grade tumors or infiltrative regions and also pose challenges such as phototoxicity and poor depth resolution. In contrast, near-infrared (NIR) fluorescence imaging represents a promising next-generation approach, providing superior tissue penetration, reduced autofluorescence, and real-time delineation of tumor margins. This review explores the mechanisms, clinical applications, and limitations of currently approved FGS agents and highlights future directions in image-guided neurosurgery.