Jean Hanson

Dr. Jean Hanson


Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 April 2020 in Agronomy
Verified
Journal Article
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EHErmias Haile
Ermias Haile
1M1. Meki Muktar
1. Meki Muktar
AAAsebe Abdena
Asebe Abdena
JHJean Hanson
Jean Hanson
ASAlieu M. Sartie
Alieu M. Sartie
CJChris Jones
Chris Jones
The evaluation of forage crops for adaptability and performance across production systems and environments is one of the main strategies used to improve forage production. To enhance the genetic resource base and identify traits responsible for increased feed potential of Napier grass, forty-five genotypes from Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA), Brazil, were evaluated for forage biomass yield and feed nutritional quality in a replicated trial under wet and dry season conditions in Ethiopia. The results revealed significant variation in forage yield and feed nutritional qualities among the genotypes and between the wet and dry seasons. Feed fiber components were lower in the dry season, while crude protein, in vitro organic matter digestibility, and metabolizable energy were higher. Based on the cumulative biomass and metabolizable energy yield, top performing genotypes were identified that are candidates for future forage improvement studies. Furthermore, the marker-trait association study identified diagnostic single nucleotide polymorphisms (SNP) and SilicoDArT markers and potential candidate genes that could differentiate high biomass yielding and high metabolizable energy genotypes in the collection.

2 April 2020 in Plants
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Journal Article
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JHJean Hanson
Jean Hanson
RERichard Ellis
Richard Ellis
Forages provide an important livestock feed resource globally, particularly for millions of smallholder farmers, and have important roles in natural resource management and carbon sequestration, reducing soil erosion and mitigating the effects of climate change. Forage germplasm remains the basis for the selection and development of new, higher-yielding and better adaptedgenotypes to meet the increasing demand for livestock feed. Rapid rates of genetic erosion of forage diversity due to land-use change from natural pastures and rangelands to crop production to meet the food security requirements of a growing global population, together with pressures from a changing climate, highlight the necessity for ex situ seed conservation of forage genetic resources to provide germplasm for use by future generations. Whilst many forage species have orthodox seeds, the diverse range of genera and species which provide forage is a challenge in terms of the wide scope of information and understanding on conservation methods that genebank managers require—particularly for tropical forages, many of which are comparatively under-researched. We review the challenges to the conservation of tropical forage species by seed in ex situ genebanks and provide information on optimum methods for their management.

10 August 2021 in Genes
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ANAlemayehu Teressa Negawo
Alemayehu Teressa Negawo
1M1. Meki Muktar
1. Meki Muktar
YAYilikal Assefa
Yilikal Assefa
JHJean Hanson
Jean Hanson
ASAlieu M. Sartie
Alieu M. Sartie
CJChris Jones
Chris Jones
Rhodes grass (Chloris gayana Kunth) is one of the most important forage grasses used throughout the tropical and subtropical regions of the world. Enhancing the conservation and use of genetic resources requires the development of knowledge and understanding about the existing global diversity of the species. In this study, 104 Rhodes grass accessions, held in trust in the ILRI forage genebank, were characterized using DArTSeq markers to evaluate the genetic diversity and population structure, and to develop representative subsets, of the collection. The genotyping produced 193,988 SNP and 142,522 SilicoDArT markers with an average polymorphic information content of 0.18 and 0.26, respectively. Hierarchical clustering using selected informative markers showed the presence of two and three main clusters using SNP and SilicoDArT markers, respectively, with a cophenetic correction coefficient of 82%. Bayesian population structure analysis also showed the presence of two main subpopulations using both marker types indicating the existence of significant genetic variation in the collection. A representative subset, containing 21 accessions from diverse origins, was developed using the SNP markers. In general, the results revealed substantial genetic diversity in the Rhodes grass collection, and the generated molecular information, together with the developed subset, should help enhance the management, use and improvement of Rhodes grass germplasm in the future.

18 April 2024 in Plant Genetic Resources: Characterization and Utilization
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Journal Article
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JHJean Hanson
Jean Hanson
CLCharlotte Lusty
Charlotte Lusty
BFBonnie Furman
Bonnie Furman
DEDavid Ellis
David Ellis
TPThomas Payne
Thomas Payne
MHMichael Halewood
Michael Halewood
Efficient conservation and sustainable use of crop diversity is critical to support global food and nutritional security with ex situ collections stored in over 800 genebanks in 115 countries. The challenge is to manage those collections for long-term conservation of crop diversity and sustainable use to respond to global challenges of food security and climate change. The Genebank Standards for Plant Genetic Resources for Food and Agricutlure (Genebank Standards) form the overall framework for curation of ex situ crop collections, allowing considerable flexibility to develop customized approaches to conserving different crops. Stratified curation involves strategically tailoring curation to specific genebank goals, crops, priorities and resources for each accession based on all available information to prioritize accessions for long-term conservation. It implies using scarce resources where they are most needed and recognizes that accessions can be (a) fully curated to international standards; (b) partially curated for storage for a limited time; (c) archived and stored but no longer curated and available from the genebank; or (d) historical and removed entirely from the genebank. The stratified approach is consistent with the Genebank Standards and the policy framework of the International Treaty on Plant Genetic Resources for Food and Agriculture. Stratified curation encourages curators to make difficult decisions on accession management to better respond to challenges of curating large collections of crop diversity.

27 February 2020 in Diversity
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Journal Article
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ANAlemayehu Teressa Negawo
Alemayehu Teressa Negawo
YAYilikal Assefa
Yilikal Assefa
JHJean Hanson
Jean Hanson
AAAsebe Abdena
Asebe Abdena
1M1. Meki Muktar
1. Meki Muktar
CJChris Jones
Chris Jones
Buffelgrass (Cenchrus ciliaris L.) is an important forage grass widely grown across the world with many good characteristics including high biomass yield, drought tolerance, and adaptability to a wide range of soil conditions and agro-ecologies. Two hundred and five buffelgrass accessions from diverse origins, conserved as part of the in-trust collection in the ILRI genebank, were analyzed by genotyping-by-sequencing using the DArTseq platform. The genotyping generated 234,581 single nucleotide polymorphism (SNP) markers, with polymorphic information content (PIC) values ranging from 0.005 to 0.5, and the short sequences of the markers were aligned with foxtail millet (Setaria italica) as a reference genome to generate genomic map positions of the markers. One thousand informative SNP markers, representing a broad coverage of the reference genome and with an average PIC value of 0.35, were selected for population structure and diversity analyses. The population structure analysis suggested two main groups, while the hierarchical clustering showed up to eight clusters in the collection. A representative core collection containing 20% of the accessions in the collection, with germplasm from 10 African countries and Oman, was developed. In general, the study revealed the presence of considerable genetic diversity and richness in the collection and a core collection that could be used for further analysis for specific traits of interest.

3 April 2019 in African Journal of Range & Forage Science
Verified
Journal Article
Open access
ATAsheber Tegegn
Asheber Tegegn
MKMartina Kyalo
Martina Kyalo
CMCollins Mutai
Collins Mutai
JHJean Hanson
Jean Hanson
GAGetnet Asefa
Getnet Asefa
SGSita Ghimire
Sita Ghimire
Brachiaria is a tropical, warm-season grass native to Africa. It is an extensively cultivated forage in the tropics with proven benefits on livestock productivity. Brachiaria is well-known for high biomass production, animal nutrition, carbon sequestration, biological nitrification inhibition, soil conservation, and adaptation to drought and low fertility soils. However, the use of Brachiaria grass for fodder production in Africa has been little explored largely due to lack of cultivars suitable to different production environments. The exploration and use of natural diversity is fundamental for an efficient Brachiaria breeding program. We analysed genetic diversity and population structure of 112 Ethiopian Brachiaria brizantha accessions using 23 microsatellite markers. A total of 459 alleles were detected with an average polymorphic information content of 0.75 suggesting high discriminating ability of these markers. The molecular variance analysis showed a high contribution (86%) of within-cluster diffe...