Paweł Wityk

Dr. Paweł Wityk

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 September 2021 in Microorganisms
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BKBeata Krawczyk
Beata Krawczyk
PWPaweł Wityk
Paweł Wityk
MGMirosława Gałęcka
Mirosława Gałęcka
MMMichał Michalik
Michał Michalik
Enterococcus spp. are Gram-positive, facultative, anaerobic cocci, which are found in the intestinal flora and, less frequently, in the vagina or mouth. Enterococcus faecalis and Enterococcus faecium are the most common species found in humans. As commensals, enterococci colonize the digestive system and participate in the modulation of the immune system in humans and animals. For many years reference enterococcal strains have been used as probiotic food additives or have been recommended as supplements for the treatment of intestinal dysbiosis and other conditions. The use of Enterococcus strains as probiotics has recently become controversial due to the ease of acquiring different virulence factors and resistance to various classes of antibiotics. Enterococci are also seen as opportunistic pathogens. This problem is especially relevant in hospital environments, where enterococcal outbreaks often occur. Their ability to translocate from the gastro-intestinal tract to various tissues and organs as well as their virulence and antibiotic resistance are risk factors that hinder eradication. Due to numerous reports on the plasticity of the enterococcal genome and the acquisition of pathogenic microbial features, we ask ourselves, how far is this commensal genus from acquiring pathogenicity? This paper discusses both the beneficial properties of these microorganisms and the risk factors related to their evolution towards pathogenicity.

24 June 2015 in The Journal of Physical Chemistry B
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Journal Article
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Janusz RakJanusz Rak
Janusz Rak
LCLidia Chomicz
Lidia Chomicz
JWJustyna Wiczk
Justyna Wiczk
KWKinga Westphal
Kinga Westphal
Magdalena ZdrowowiczMagdalena Zdrowowicz
Magdalena Zdrowowicz
ŁGŁukasz Golon
Łukasz Golon

10 June 2022 in Science Advances
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Journal Article
Open access
ECE. Sandra Chocron
E. Sandra Chocron
EMErin Munkácsy
Erin Munkácsy
HKHarper S. Kim
Harper S. Kim
PKPrzemysław Karpowicz
Przemysław Karpowicz
NJNisi Jiang
Nisi Jiang
APAndrew M. Pickering
Andrew M. Pickering
The proteasome has key roles in neuronal proteostasis, including the removal of misfolded and oxidized proteins, presynaptic protein turnover, and synaptic efficacy and plasticity. Proteasome dysfunction is a prominent feature of Alzheimer’s disease (AD). We show that prevention of proteasome dysfunction by genetic manipulation delays mortality, cell death, and cognitive deficits in fly and cell culture AD models. We developed a transgenic mouse with neuronal-specific proteasome overexpression that, when crossed with an AD mouse model, showed reduced mortality and cognitive deficits. To establish translational relevance, we developed a set of TAT-based proteasome-activating peptidomimetics that stably penetrated the blood-brain barrier and enhanced 20 S /26 S proteasome activity. These agonists protected against cell death, cognitive decline, and mortality in cell culture, fly, and mouse AD models. The protective effects of proteasome overexpression appear to be driven, at least in part, by the proteasome’s increased turnover of the amyloid precursor protein along with the prevention of overall proteostatic dysfunction.

1 March 2014 in Chemical Physics Letters
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Journal Article
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MWMiłosz Wieczór
Miłosz Wieczór
PWPaweł Wityk
Paweł Wityk
JCJacek Czub
Jacek Czub
LCLidia Chomicz
Lidia Chomicz
Janusz RakJanusz Rak
Janusz Rak

27 May 2015 in Physical Chemistry Chemical Physics
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Magdalena ZdrowowiczMagdalena Zdrowowicz
Magdalena Zdrowowicz
LCLidia Chomicz
Lidia Chomicz
MŻMichał Żyndul
Michał Żyndul
PWPaweł Wityk
Paweł Wityk
Janusz RakJanusz Rak
Janusz Rak
MSMichael Sevilla
Michael Sevilla
In this work, we have synthesized 5-thiocyanato-2′-deoxyuridine (SCNdU) along with the C6-deuterated nucleobase 5-thiocyanatouracil (6-D-SCNU) and studied their reactions with radiation-produced electrons. ESR spectra in γ-irradiated nitrogen-saturated frozen homogeneous solutions (7.5 M LiCl in H2O or D2O) of these compounds show that electron-induced S–CN bond cleavage occurs to form a thiyl radical (dU-5-S˙ or 6-D-U-5-S˙) and CN−via the initial π-anion radical (SCNdU˙−) intermediate in which the excess electron is on the uracil base. HPLC and LC-MS/MS studies of γ-irradiated N2-saturated aqueous solutions of SCNdU in the presence of sodium formate as a OH-radical scavenger at ambient temperature show the formation of the dU-5S-5S-dU dimer in preference to dU by about 10 to 1 ratio. This shows that both possible routes of electron-induced bond cleavage (dUC5–SCN and S–CN) in SCNdU˙− and dU-5-S˙ formation are preferred for the production of the σ-type uracilyl radical (dU˙) by 10 fold. DFT/M06-2x/6-31++G(d,p) calculations employing the polarizable continuum model (PCM) for aqueous solutions show that dU-5-S˙ and CN− formation was thermodynamically favored by over 15 kcal mol−1 (ΔG) compared to dU˙ and SCN− production. The activation barriers for C5–S and S–CN bond cleavage in SCNdU˙− amount to 8.7 and 4.0 kcal mol−1, respectively, favoring dU-5-S˙ and CN− formation. These results support the experimental observation of S–CN bond cleavage by electron addition to SCNdU that results in the formation of dU-5-S˙ and the subsequent dU-5S-5S-dU dimer. This establishes SCNdU as a potential radiosensitizer that could cause intra- and inter-strand crosslinking as well as DNA–protein crosslinking via S–S dimer formation.

12 June 2018 in RSC Advances
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SMSamanta Makurat
Samanta Makurat
Magdalena ZdrowowiczMagdalena Zdrowowicz
Magdalena Zdrowowicz
LCLidia Chomicz-Mańka
Lidia Chomicz-Mańka
WKWitold Kozak
Witold Kozak
ISIllia E. Serdiuk
Illia E. Serdiuk
Janusz RakJanusz Rak
Janusz Rak
5-Selenocyanato-2′-deoxyuridine (SeCNdU) and 5-trifluoromethanesulfonyl-2′-deoxyuridine (OTfdU) have been synthesized and their structures have been confirmed with NMR and MS methods. Both compounds undergo dissociative electron attachment (DEA) when irradiated with X-rays in an aqueous solution containing a hydroxyl radical scavenger. The DEA yield of SeCNdU significantly exceeds that of 5-bromo-2′-deoxyuridine (BrdU), remaining in good agreement with the computationally revealed profile of electron-induced degradation. The radiolysis products indicate, in line with theoretical predictions, Se–CN bond dissociation as the main reaction channel. On the other hand, the DEA yield for OTfdU is slightly lower than the degradation yield measured for BrdU, despite the fact that the calculated driving force for the electron-induced OTfdU dissociation substantially overpasses the thermodynamic stimulus for BrdU degradation. Moreover, the calculated DEA profile suggests that the electron attachment induced formation of 5-hydroxy-2′-deoxyuridine (OHdU) from OTfdU, while 2′-deoxyuridine (dU) is mainly observed experimentally. We explained this discrepancy in terms of the increased acidity of OTfdU resulting in efficient deprotonation of the N3 atom, which brings about the domination of the OTfdU(N3–H)− anion in the equilibrium mixture. As a consequence, electron addition chiefly leads to the radical dianion, OTfdU(N3–H)˙2−, which easily protonates at the C5 site. As a result, the C5–O rather than O–S bond undergoes dissociation, leading to dU, observed experimentally. A negligible cytotoxicity of the studied compounds toward the MCF-7 cell line at the concentrations used for cell labelling calls for further studies aiming at the clinical use of the proposed derivatives.