Jan Rybniker

Dr. Jan Rybniker

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Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 April 2020 in Mycoses
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Journal Article
Open access
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PKPhilipp Koehler
Philipp Koehler
OCOliver A. Cornely
Oliver A. Cornely
Bernd BöttigerBernd Böttiger
Bernd Böttiger
FDFabian Dusse
Fabian Dusse
DEDennis A. Eichenauer
Dennis A. Eichenauer
ASAlexander Shimabukuro-Vornhagen
Alexander Shimabukuro-Vornhagen
Summary: Objectives: Patients with acute respiratory distress syndrome (ARDS) due to viral infection are at risk for secondary complications like invasive aspergillosis. Our study evaluates coronavirus disease 19 (COVID‐19) associated invasive aspergillosis at a single centre in Cologne, Germany.Methods: A retrospective chart review of all patients with COVID‐19 associated ARDS admitted to the medical or surgical intensive care unit at the University Hospital of Cologne, Cologne, Germany.Results: COVID‐19 associated invasive pulmonary aspergillosis was found in five of 19 consecutive critically ill patients with moderate to severe ARDS.Conclusion: Clinicians caring for patients with ARDS due to COVID‐19 should consider invasive pulmonary aspergillosis and subject respiratory samples to comprehensive analysis to detect co‐infection.

25 October 2019 in Deutsches Ärzteblatt international
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Journal Article
Closed access
ISIsabelle Suárez
Isabelle Suárez
SFSarah Maria Fünger
Sarah Maria Fünger
SKStefan Kröger
Stefan Kröger
JRJessica Rademacher
Jessica Rademacher
GFGerd Fätkenheuer
Gerd Fätkenheuer
JRJan Rybniker
Jan Rybniker
Tuberculosis (TB) is one of the ten leading causes of death worldwide (1). In Germany and other highly developed countries, however, TB occurs relatively seldom and can almost always be treated successfully. The rarity of TB means that not all...

16 June 2021 in EMBO Molecular Medicine
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Journal Article
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STSebastian J Theobald
Sebastian J Theobald
ASAlexander Simonis
Alexander Simonis
TGTheodoros Georgomanolis
Theodoros Georgomanolis
CKChristoph Kreer
Christoph Kreer
MZMatthias Zehner
Matthias Zehner
JRJan Rybniker
Jan Rybniker
Innate immunity triggers responsible for viral control or hyperinflammation in COVID‐19 are largely unknown. Here we show that the SARS‐CoV‐2 spike protein (S‐protein) primes inflammasome formation and release of mature interleukin‐1β (IL‐1β) in macrophages derived from COVID‐19 patients but not in macrophages from healthy SARS‐CoV‐2 naïve individuals. Furthermore, longitudinal analyses reveal robust S‐protein‐driven inflammasome activation in macrophages isolated from convalescent COVID‐19 patients, which correlates with distinct epigenetic and gene expression signatures suggesting innate immune memory after recovery from COVID‐19. Importantly, we show that S‐protein‐driven IL‐1β secretion from patient‐derived macrophages requires non‐specific monocyte pre‐activation in vivo to trigger NLRP3‐inflammasome signaling. Our findings reveal that SARS‐CoV‐2 infection causes profound and long‐lived reprogramming of macrophages resulting in augmented immunogenicity of the SARS‐CoV‐2 S‐protein, a major vaccine antigen and potent driver of adaptive and innate immune signaling.

18 July 2010 in Molecular Microbiology
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Journal Article
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JRJan Rybniker
Jan Rybniker
ANAngela Nowag
Angela Nowag
EGEdeltraud Van Gumpel
Edeltraud Van Gumpel
NNNicole Nissen
Nicole Nissen
NRNirmal Robinson
Nirmal Robinson
PHPia Hartmann
Pia Hartmann
Summary: WhiB‐like proteins of actinomycetes are known to co‐ordinate iron‐sulfur (Fe‐S) clusters and are believed to have regulatory functions in many essential bacterial processes. The systematic determination of the genome sequences of mycobacteriophages has revealed the presence of several whiB‐like genes in these viruses. Here we focussed on the WhiB‐like protein of mycobacteriophage TM4, WhiBTM4. We provide evidence that this viral protein is capable of co‐ordinating a Fe‐S cluster. The UV‐visible absorption spectra obtained from freshly purified and reconstituted WhiBTM4 were consistent with the presence of an oxygen sensitive [2Fe‐2S] cluster. Expression of WhiBTM4 in the mycobacterial host led to hindered septation resembling a WhiB2 knockout phenotype whereas basal expression of WhiBTM4 led to superinfection exclusion. The quantification of mRNA‐levels during phage infection showed that whiBTM4 is a highly transcribed early phage gene and a dominant negative regulator of WhiB2. Strikingly, both apo‐WhiB2 of Mycobacterium tuberculosis and apo‐WhiBTM4 were capable of binding to the conserved promoter region upstream of the whiB2 gene indicating that WhiB2 regulates its own synthesis which is inhibited in the presence of WhiBTM4. Thus, we provide substantial evidence supporting the hypothesis of viral and bacterial WhiB proteins being important Fe‐S containing transcriptional regulators with DNA‐binding capability.

1 November 2023 in Cell
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Journal Article
Closed access
ASAlexander Simonis
Alexander Simonis
CKChristoph Kreer
Christoph Kreer
AAAlexandra Albus
Alexandra Albus
KRKatharina Rox
Katharina Rox
BYBiao Yuan
Biao Yuan
JRJan Rybniker
Jan Rybniker

8 February 2019 in Nature Communications
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Journal Article
Open access
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JGJessica Gräb
Jessica Gräb
ISIsabelle Suárez
Isabelle Suárez
EGEdeltraud van Gumpel
Edeltraud van Gumpel
SWSandra Winter
Sandra Winter
FSFynn Schreiber
Fynn Schreiber
JRJan Rybniker
Jan Rybniker
Corticosteroids are host-directed drugs with proven beneficial effect on survival of tuberculosis (TB) patients, but their precise mechanisms of action in this disease remain largely unknown. Here we show that corticosteroids such as dexamethasone inhibit necrotic cell death of cells infected with Mycobacterium tuberculosis (Mtb) by facilitating mitogen-activated protein kinase phosphatase 1 (MKP-1)-dependent dephosphorylation of p38 MAPK. Characterization of infected mixed lineage kinase domain-like (MLKL) and tumor necrosis factor receptor 1 (TNFR1) knockout cells show that the underlying mechanism is independent from TNFα-signaling and necroptosis. Our results link corticosteroid function and p38 MAPK inhibition to abrogation of necrotic cell death mediated by mitochondrial membrane permeability transition, and open new avenues for research on novel host-directed therapies (HDT).