This report describes 12 major practices during data handling that predispose machine learning systems to mathematical bias. Minimizing bias is critical to adoption and implementation of machine learning (ML) in clinical practice. Systematic mathematical biases produce consistent and reproducible differences between the ...
In recent years, deep learning (DL) has shown impressive performance in radiologic image analysis. However, for a DL model to be useful in a real-world setting, its confidence in a prediction must also be known. Each DL model's output has an estimated probability, and these estimated probabilities are not always reliable. Uncertainty represents the trustworthiness (validity) of estimated probabilities. The higher the uncertainty, the lower the validity. Uncertainty quantification (UQ) methods determine the uncertainty level of each prediction. Predictions made without UQ methods are generally not trustworthy. By implementing UQ in medical DL models, users can be alerted when a model does not have enough information to make a confident decision. Consequently, a medical expert could reevaluate the uncertain cases, which would eventually lead to gaining more trust when using a model. This review focuses on recent trends using UQ methods in DL radiologic image analysis within a conceptual framework. Also discussed in this review are potential applications, challenges, and future directions of UQ in DL radiologic image analysis.
24 August 2022 in Radiology: Artificial Intelligence
“Just Accepted” papers have undergone full peer review and have been accepted for publication in Radiology: Artificial Intelligence. This article will undergo copyediting, layout, and proof review ...
24 August 2022 in Radiology: Artificial Intelligence
This report reviews potential biases during machine learning model development and proposes possible mitigation strategies for radiology artificial intelligence studies. There are increasing concerns about the bias and fairness of artificial intelligence (AI) models as they are put into clinical practice. Among the steps for implementing machine learning tools into...
Chest X-rays (CXR) are essential for diagnosing a variety of conditions, but when used on new populations, model generalizability issues limit their efficacy. Generative AI, particularly denoising diffusion probabilistic models (DDPMs), offers a promising approach to generating synthetic images, enhancing dataset diversity. This study investigates the impact of synthetic data supplementation on the performance and generalizability of medical imaging research. The study employed DDPMs to create synthetic CXRs conditioned on demographic and pathological characteristics from the CheXpert dataset. These synthetic images were used to supplement training datasets for pathology classifiers, with the aim of improving their performance. The evaluation involved three datasets (CheXpert, MIMIC-CXR, and Emory Chest X-ray) and various experiments, including supplementing real data with synthetic data, training with purely synthetic data, and mixing synthetic data with external datasets. Performance was assessed using the area under the receiver operating curve (AUROC). Adding synthetic data to real datasets resulted in a notable increase in AUROC values (up to 0.02 in internal and external test sets with 1000% supplementation, p-value <0.01 in all instances). When classifiers were trained exclusively on synthetic data, they achieved performance levels comparable to those trained on real data with 200%-300% data supplementation. The combination of real and synthetic data from different sources demonstrated enhanced model generalizability, increasing model AUROC from 0.76 to 0.80 on the internal test set (p-value <0.01). Synthetic data supplementation significantly improves the performance and generalizability of pathology classifiers in medical imaging. Dr. Gichoya is a 2022 Robert Wood Johnson Foundation Harold Amos Medical Faculty Development Program and declares support from RSNA Health Disparities grant (#EIHD2204), Lacuna Fund (#67), Gordon and Betty Moore Foundation, NIH (NIBIB) MIDRC grant under contracts 75N92020C00008 and 75N92020C00021, and NHLBI Award Number R01HL167811.
Thyroid Ultrasound (US) is the primary method to evaluate thyroid nodules. Deep learning (DL) has been playing a significant role in evaluating thyroid cancer. We propose a DL-based pipeline to detect and classify thyroid nodules into benign or malignant groups relying on two views of US imaging. Transverse and longitudinal US images of thyroid nodules from 983 patients were collected retrospectively. Eighty-one cases were held out as a testing set, and the rest of the data were used in five-fold cross-validation (CV). Two You Look Only Once (YOLO) v5 models were trained to detect nodules and classify them. For each view, five models were developed during the CV, which was ensembled by using non-max suppression (NMS) to boost their collective generalizability. An extreme gradient boosting (XGBoost) model was trained on the outputs of the ensembled models for both views to yield a final prediction of malignancy for each nodule. The test set was evaluated by an expert radiologist using the American College of Radiology Thyroid Imaging Reporting and Data System (ACR-TIRADS). The ensemble models for each view achieved a mAP0.5 of 0.797 (transverse) and 0.716 (longitudinal). The whole pipeline reached an AUROC of 0.84 (CI 95%: 0.75–0.91) with sensitivity and specificity of 84% and 63%, respectively, while the ACR-TIRADS evaluation of the same set had a sensitivity of 76% and specificity of 34% (p-value = 0.003). Our proposed work demonstrated the potential possibility of a deep learning model to achieve diagnostic performance for thyroid nodule evaluation.