Damjan Franjević

Prof. Dr. Damjan Franjević

Department of Biology, University of Zagreb, Faculty of Science, Zagreb, Zagreb, Grad, Croatia
orcid
Fungus mugit

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 February 2009 in Molecular Ecology
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VZValerija Zakšek
Valerija Zakšek
BSBoris Sket
Boris Sket
SGSanja Gottstein
Sanja Gottstein
Damjan FranjevićDamjan Franjević
Damjan Franjević
PTPeter Trontelj
Peter Trontelj

1 January 2018 in Journal of Molecular Biology
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ISIvan Andreas Stancik
Ivan Andreas Stancik
MŠMartin Sebastijan Šestak
Martin Sebastijan Šestak
Boyang JiBoyang Ji
Boyang Ji
MAMarina Axelson-Fisk
Marina Axelson-Fisk
Damjan FranjevićDamjan Franjević
Damjan Franjević
Ivan MijakovicIvan Mijakovic
Ivan Mijakovic
The main family of serine/threonine/tyrosine protein kinases present in eukarya was defined and described by Hanks et al. in 1988 (Science, 241, 42-52). It was initially believed that these kinases do not exist in bacteria, but extensive genome sequencing revealed their existence in many bacteria. For historical reasons, the term "eukaryotic-type kinases" propagated in the literature to describe bacterial members of this protein family. Here, we argue that this term should be abandoned as a misnomer, and we provide several lines of evidence to support this claim. Our comprehensive phylostratigraphic analysis suggests that Hanks-type kinases present in eukarya, bacteria and archaea all share a common evolutionary origin in the lineage leading to the last universal common ancestor (LUCA). We found no evidence to suggest substantial horizontal transfer of genes encoding Hanks-type kinases from eukarya to bacteria. Moreover, our systematic structural comparison suggests that bacterial Hanks-type kinases resemble their eukaryal counterparts very closely, while their structures appear to be dissimilar from other kinase families of bacterial origin. This indicates that a convergent evolution scenario, by which bacterial kinases could have evolved a kinase domain similar to that of eukaryal Hanks-type kinases, is not very likely. Overall, our results strongly support a monophyletic origin of all Hanks-type kinases, and we therefore propose that this term should be adopted as a universal name for this protein family.

1 October 2011 in Biochimica et Biophysica Acta (BBA) - General Subjects
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AKAhasanul Kobir
Ahasanul Kobir
LSLei Shi
Lei Shi
ABAna Boskovic
Ana Boskovic
CGChristophe Grangeasse
Christophe Grangeasse
Damjan FranjevićDamjan Franjević
Damjan Franjević
Ivan MijakovicIvan Mijakovic
Ivan Mijakovic

18 February 2013 in Freshwater Biology
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Goran KlobučarGoran Klobučar
Goran Klobučar
MPMartina Podnar
Martina Podnar
MJMišel Jelić
Mišel Jelić
Damjan FranjevićDamjan Franjević
Damjan Franjević
MFMatej Faller
Matej Faller
IMIvana Maguire
Ivana Maguire

17 September 2014 in Frontiers in Microbiology
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LSLei Shi
Lei Shi
NPNathalie Pigeonneau
Nathalie Pigeonneau
VRVaishnavi Ravikumar
Vaishnavi Ravikumar
PDPaula Dobrinic
Paula Dobrinic
BMBoris Macek
Boris Macek
Ivan MijakovicIvan Mijakovic
Ivan Mijakovic
Bacteria possess protein serine/threonine and tyrosine kinases which resemble eukaryal kinases in their capacity to phosphorylate multiple substrates. We hypothesized that the analogy might extend further, and bacterial kinases may also undergo mutual phosphorylation and activation, which is currently considered as a hallmark of eukaryal kinase networks. In order to test this hypothesis, we explored the capacity of all members of four different classes of serine/threonine and tyrosine kinases present in the firmicute model organism Bacillus subtilis to phosphorylate each other in vitro and interact with each other in vivo. The interactomics data suggested a high degree of connectivity among all types of kinases, while phosphorylation assays revealed equally wide-spread cross-phosphorylation events. Our findings suggest that the Hanks-type kinases PrkC, PrkD and YabT exhibit the highest capacity to phosphorylate other B. subtilis kinases, while the BY-kinase PtkA and the two-component-like kinases RsbW and SpoIIAB show the highest propensity to be phosphorylated by other kinases. Analysis of phosphorylated residues on several selected recipient kinases suggests that most cross-phosphorylation events concern key regulatory residues. Therefore, cross-phosphorylation events are very likely to influence the capacity of recipient kinases to phosphorylate substrates downstream in the signal transduction cascade. We therefore conclude that bacterial serine/threonine and tyrosine kinases probably engage in a network-type behavior previously described only in eukaryal cells.

13 July 2020 in ZooKeys
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Josip SkejoJosip Skejo
Josip Skejo
MCMatthew Connors
Matthew Connors
MHMichael Hendriksen
Michael Hendriksen
NLNick Lambert
Nick Lambert
GCGriffin Chong
Griffin Chong
Damjan FranjevićDamjan Franjević
Damjan Franjević
Knowledge on the pygmy grasshoppers of Australia is, despite the numerous endemics being described from this unique continent, still scarce. Of interest is the Vingselina genus group, including genera Anaselina Storozhenko, 2019, Paraselina Storozhenko, 2019, Selivinga Storozhenko, 2019 and Vingselina Sjostedt, 1921. The systematic position of this group, currently assigned to Batrachideinae (Bufonidini), is probably not correct. In this study new records are presented of Anaselina minor (Sjostedt, 1921), Paraselina brunneri (Bolivar, 1887), P trituberculata (Sjastedt, 1932), and Selivinga tribulata Storozhenko, 2019, all except A. minor the first records of the species since their original descriptions. The first photographs of living specimens of A. minor, P. brunneri, P. trituberculata and S. tribulata are provided and their habitats described. All the records were compiled by citizen scientists who use online social media, such as iNaturalist. Lastly, P. multifora (Rehn, 1952) syn. nov. represents a junior synonym of P. brunneri.