Yash Gupta

Dr. Yash Gupta

Department of Medicine, Pennsylvania State University College of Medicine, Hershey, Pennsylvania, USA
orcid

Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 October 2020 in Gastroenterology
Verified
Journal Article
Closed access
Manmeet RawatManmeet Rawat
Manmeet Rawat
MNMeghali Nighot
Meghali Nighot
RARana Al-Sadi
Rana Al-Sadi
Yash GuptaYash Gupta
Yash Gupta
DVDharmaprakash Viszwapriya
Dharmaprakash Viszwapriya
TMThomas Ma
Thomas Ma

25 September 2019 in Genes
Verified
Journal Article
Open access
PDF file
Manmeet RawatManmeet Rawat
Manmeet Rawat
KKKavita Kadian
Kavita Kadian
Yash GuptaYash Gupta
Yash Gupta
Anand KumarAnand Kumar
Anand Kumar
PCpatrick chain
patrick chain
GPGulshan Parasher
Gulshan Parasher
Pancreatic cancer is one of the most aggressive malignancies, accounting for more than 45,750 deaths annually in the U.S. alone. The aggressive nature and late diagnosis of pancreatic cancer, coupled with the limitations of existing chemotherapy, present the pressing need for the development of novel therapeutic strategies. Recent reports have demonstrated a critical role of microRNAs (miRNAs) in the initiation, progression, and metastasis of cancer. Furthermore, aberrant expressions of miRNAs have often been associated with the cause and consequence of pancreatic cancer, emphasizing the possible use of miRNAs in the effective management of pancreatic cancer patients. In this review, we provide a brief overview of miRNA biogenesis and its role in fundamental cellular process and miRNA studies in pancreatic cancer patients and animal models. Subsequent sections narrate the role of miRNA in, (i) cell cycle and proliferation; (ii) apoptosis; (iii) invasions and metastasis; and (iv) various cellular signaling pathways. We also describe the role of miRNA’s in pancreatic cancer; (i) diagnosis; (ii) prognosis and (iii) therapeutic intervention. Conclusion section describes the gist of review with future directions.

18 November 2010 in Proteome Science
Verified
Journal Article
Open access
PDF file
PSPrashant Sharma
Prashant Sharma
BKBhavnesh Kumar
Bhavnesh Kumar
Yash GuptaYash Gupta
Yash Gupta
NSNeelja Singhal
Neelja Singhal
VKVishwa Mohan Katoch
Vishwa Mohan Katoch
DBDeepa Bisht
Deepa Bisht
Background: Streptomycin (SM) is a broad spectrum antibiotic and is an important component of any anti-tuberculosis therapy regimen. Several mechanisms have been proposed to explain the emergence of resistance but still our knowledge is inadequate. Proteins form a very complex network and drugs are countered by their modification/efflux or over expression/modification of targets. As proteins manifest most of the biological processes, these are attractive targets for developing drugs, immunodiagnostics or therapeutics. The aim of present study was to analyze and compare the protein profile of whole cell extracts from Mycobacterium tuberculosis clinical isolates susceptible and resistant to SM. Results: Two-dimensional gel electrophoresis (2DE) and matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry was employed for analyzing the protein profiles. Homology and in silico characterization for identified proteins was assessed using BLAST, InterProScan and KEGG database searches. Computational studies on the possible interactions between SM and identified proteins were carried out by a battery of online servers and softwares, namely, CLUSTALW (KEGG), I-TASSER, VMD, PatchDock and FireDock. On comparing 2DE patterns, nine proteins were found consistently overexpressed in SM resistant isolates and were identified as Rv0350, Rv0440, Rv1240, Rv3075c, Rv2971, Rv3028c, Rv2145c, Rv2031c and Rv0569. In silico docking analysis showed significant interactions of SM with essential (Rv0350, Rv0440 and Rv2971) and non essential (Rv1240, Rv3075c and Rv2031c) genes. Conclusions: The computational results suggest high protein binding affinity of SM and suggested many possible interactions between identified proteins and the drug. Bioinformatic analysis proves attributive for analysis of diversity of proteins identified by whole proteome analysis. In-depth study of the these proteins will give an insight into probable sites of drug action other than established primary sites and hence may help in search of novel chemotherapeutic agents at these new sites as inhibitors.

1 November 2021 in Methods
Verified
Journal Article
Closed access
Yash GuptaYash Gupta
Yash Gupta
DMDawid Maciorowski
Dawid Maciorowski
SZSamantha E. Zak
Samantha E. Zak
KJKrysten A. Jones
Krysten A. Jones
RKRahul S. Kathayat
Rahul S. Kathayat
Prakasha KempaiahPrakasha Kempaiah
Prakasha Kempaiah

8 January 2022 in Journal of Cellular Biochemistry
Verified
Journal Article
Open access
PDF file
Yash GuptaYash Gupta
Yash Gupta
DMDawid Maciorowski
Dawid Maciorowski
BMBrian Medernach
Brian Medernach
DBDaniel P. Becker
Daniel P. Becker
RDRavi Durvasula
Ravi Durvasula
Prakasha KempaiahPrakasha Kempaiah
Prakasha Kempaiah
After more than a year of the COVID‐19 pandemic, SARS‐CoV‐2 infection rates with newer variants continue to devastate much of the world. Global healthcare systems are overwhelmed with high positive patient numbers. Silent hypoxia accompanied by rapid deterioration and some cases with septic shock is responsible for COVID‐19 mortality in many hospitalized patients. There is an urgent need to further understand the relationships and interplay with human host components during pathogenesis and immune evasion strategies. Currently, acquired immunity through vaccination or prior infection usually provides sufficient protection against the emerging variants of SARS‐CoV‐2 except Omicron variant requiring recent booster. New strains have shown higher viral loads and greater transmissibility with more severe disease presentations. Notably, COVID‐19 has a peculiar prognosis in severe patients with iron dysregulation and hypoxia which is still poorly understood. Studies have shown abnormally low serum iron levels in severe infection but a high iron overload in lung fibrotic tissue. Data from our in‐silico structural analysis of the spike protein sequence along with host proteolysis processing suggests that the viral spike protein fragment mimics Hepcidin and is resistant to the major human proteases. This functional spike‐derived peptide dubbed “Covidin” thus may be intricately involved with host ferroportin binding and internalization leading to dysregulated host iron metabolism. Here, we propose the possible role of this potentially allogenic mimetic hormone corresponding to severe COVID‐19 immunopathology and illustrate that this molecular mimicry is responsible for a major pathway associated with severe disease status. Furthermore, through 3D molecular modeling and docking followed by MD simulation validation, we have unraveled the likely role of Covidin in iron dysregulation in COVID‐19 patients. Our meta‐analysis suggests the Hepcidin mimetic mechanism is highly conserved among its host range as well as among all new variants to date including Omicron. Extensive analysis of current mutations revealed that new variants are becoming alarmingly more resistant to selective human proteases associated with host defense.

26 January 2018 in Medicinal Research Reviews
Verified
Journal Article
Closed access
PDF file
POPoonam
Poonam
Yash GuptaYash Gupta
Yash Gupta
NGNikesh Gupta
Nikesh Gupta
Snigdha SinghSnigdha Singh
Snigdha Singh
Lidong WuLidong Wu
Lidong Wu
Brijesh RathiBrijesh Rathi
Brijesh Rathi