Fady Mohareb

Prof. Dr. Fady Mohareb

The Bioinformatics Group, Cranfield University, Cranfield, UK
orcid
Head of Bioinformatics

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2015 in Food Research International
Verified
Journal Article
Open access
ARA.I. Ropodi
A.I. Ropodi
DPDimitrios Pavlidis
Dimitrios Pavlidis
Fady MoharebFady Mohareb
Fady Mohareb
Efstathios PanagouEfstathios Panagou
Efstathios Panagou
GNGeorge-John Nychas
George-John Nychas

1 December 2016 in Current Opinion in Food Science
Verified
Journal Article
Open access
GNGeorge-John Nychas
George-John Nychas
EPEfstathios Z Panagou
Efstathios Z Panagou
Fady MoharebFady Mohareb
Fady Mohareb
The current safety and quality controls in the food chain are lacking or inadequately applied and fail to prevent microbial and/or chemical contamination of food products, which leads to reduced confidence among consumers. On the other hand to meet market demands food business operators (producers, retailers, resellers) and regulators need to develop and apply structured quality and safety assurance systems based on thorough risk analysis and prevention, through monitoring, recording and controlling of critical parameters covering the entire product's life cycle. However the production, supply, and processing sectors of the food chain are fragmented and this lack of cohesion results in a failure to adopt new and innovative technologies, products and processes. The potential of using information technologies, for example, data storage, communication, cloud, in tandem with data science, for example, data mining, pattern recognition, uncertainty modelling, artificial intelligence, etc., through the whole food chain including processing within the food industry, retailers and even consumers, will provide stakeholders with novel tools regarding the implementation of a more efficient food safety management system

1 September 2017 in Food Research International
Verified
Journal Article
Open access
LELucia Estelles-Lopez
Lucia Estelles-Lopez
ARAthina Ropodi
Athina Ropodi
DPDimitrios Pavlidis
Dimitrios Pavlidis
JFJenny Fotopoulou
Jenny Fotopoulou
CGChristina Gkousari
Christina Gkousari
Fady MoharebFady Mohareb
Fady Mohareb
Over the past decade, analytical approaches based on vibrational spectroscopy, hyperspectral/multispectral imagining and biomimetic sensors started gaining popularity as rapid and efficient methods for assessing food quality, safety and authentication; as a sensible alternative to the expensive and time-consuming conventional microbiological techniques. Due to the multi-dimensional nature of the data generated from such analyses, the output needs to be coupled with a suitable statistical approach or machine-learning algorithms before the results can be interpreted. Choosing the optimum pattern recognition or machine learning approach for a given analytical platform is often challenging and involves a comparative analysis between various algorithms in order to achieve the best possible prediction accuracy. In this work, "MeatReg", a web-based application is presented, able to automate the procedure of identifying the best machine learning method for comparing data from several analytical techniques, to predict the counts of microorganisms responsible of meat spoilage regardless of the packaging system applied. In particularly up to 7 regression methods were applied and these are ordinary least squares regression, stepwise linear regression, partial least square regression, principal component regression, support vector regression, random forest and k-nearest neighbours. MeatReg" was tested with minced beef samples stored under aerobic and modified atmosphere packaging and analysed with electronic nose, HPLC, FT-IR, GC-MS and Multispectral imaging instrument. Population of total viable count, lactic acid bacteria, pseudomonads, Enterobacteriaceae and B. thermosphacta, were predicted. As a result, recommendations of which analytical platforms are suitable to predict each type of bacteria and which machine learning methods to use in each case were obtained. The developed system is accessible via the link: www.sorfml.com.

5 April 2022 in Frontiers in Plant Science
Verified
Journal Article
Open access
MKMariam Kourani
Mariam Kourani
Fady MoharebFady Mohareb
Fady Mohareb
FRFaisal I. Rezwan
Faisal I. Rezwan
MAMaria Anastasiadi
Maria Anastasiadi
John HammondJohn Hammond
John Hammond
Given the current rise in global temperatures, heat stress has become a major abiotic challenge affecting the growth and development of various crops and reducing their productivity. Brassica napus, the second largest source of vegetable oil worldwide, experiences a drastic reduction in seed yield and quality in response to heat. This review outlines the latest research that explores the genetic and physiological impact of heat stress on different developmental stages of B. napus with a special attention to the reproductive stages of floral progression, organogenesis, and post flowering. Several studies have shown that extreme temperature fluctuations during these crucial periods have detrimental effects on the plant and often leading to impaired growth and reduced seed production. The underlying mechanisms of heat stress adaptations and associated key regulatory genes are discussed. Furthermore, an overview and the implications of the polyploidy nature of B. napus and the regulatory role of alternative splicing in forming a priming-induced heat-stress memory are presented. New insights into the dynamics of epigenetic modifications during heat stress are discussed. Interestingly, while such studies are scarce in B. napus, opposite trends in expression of key genetic and epigenetic components have been identified in different species and in cultivars within the same species under various abiotic stresses, suggesting a complex role of these genes and their regulation in heat stress tolerance mechanisms. Additionally, omics-based studies are discussed with emphasis on the transcriptome, proteome and metabolome of B. napus, to gain a systems level understanding of how heat stress alters its yield and quality traits. The combination of omics approaches has revealed crucial interactions and regulatory networks taking part in the complex machinery of heat stress tolerance. We identify key knowledge gaps regarding the impact of heat stress on B. napus during its yield determining reproductive stages, where in-depth analysis of this subject is still needed. A deeper knowledge of heat stress response components and mechanisms in tissue specific models would serve as a stepping-stone to gaining insights into the regulation of thermotolerance that takes place in this important crop species and support future breeding of heat tolerant crops.

1 November 2015 in Food Control
Verified
Journal Article
Open access
Fady MoharebFady Mohareb
Fady Mohareb
MIMaite Iriondo
Maite Iriondo
ADAgapi I. Doulgeraki
Agapi I. Doulgeraki
AHAngela Van Hoek
Angela Van Hoek
HAHenk Aarts
Henk Aarts
GNGeorge-John Nychas
George-John Nychas