Nikki Lyn Upfold

Ms. Nikki Lyn Upfold

Norwegian University of Science and Technology (NTNU)
orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Verified
Journal Article
Open access
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Kalaiyarasi RagunathanKalaiyarasi Ragunathan
Kalaiyarasi Ragunathan
NUNikki Lyn Upfold
Nikki Lyn Upfold
Valentyn OksenychValentyn Oksenych
Valentyn Oksenych
Cancer-associated fibroblasts (CAF) form the basis of tumor microenvironment and possess immunomodulatory functions by interacting with other cells surrounding tumor, including T lymphocytes, macrophages, dendritic cells and natural killer cells. Ionizing radiation is a broadly-used method in radiotherapy to target tumors. In mammalian cells, ionizing radiation induces various types of DNA damages and DNA damage response. Being unspecific, radiotherapy affects all the cells in tumor microenvironment, including the tumor itself, CAFs and immune cells. CAFs are extremely radio-resistant and do not initiate apoptosis even at high doses of radiation. However, following radiation, CAFs become senescent and produce a distinct combination of immunoregulatory molecules. Radiosensitivity of immune cells varies depending on the cell type due to inefficient DNA repair in, for example, monocytes and granulocytes. In this minireview, we are summarizing recent findings on the interaction between CAF, ionizing radiation and immune cells in the tumor microenvironment.

12 July 2020 in Scandinavian Journal of Immunology
Verified
Journal Article
Open access
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Sergio Miguel Castaneda ZegarraSergio Miguel Castaneda Zegarra
Sergio Miguel Castaneda Zegarra
MFMarion Fernandez
Marion Fernandez
MTMax Tkachov
Max Tkachov
RYRouan Yao
Rouan Yao
NUNikki Lyn Upfold
Nikki Lyn Upfold
Valentyn OksenychValentyn Oksenych
Valentyn Oksenych
Non‐homologous end joining (NHEJ) is the main DNA repair mechanism for the repair of double‐strand breaks (DSBs) throughout the course of the cell cycle. DSBs are generated in developing B and T lymphocytes during V(D)J recombination to increase the repertoire of B and T cell receptors. DSBs are also generated during the class switch recombination (CSR) process in mature B lymphocytes, providing distinct effector functions of antibody heavy chain constant regions. Thus, NHEJ is important for both V(D)J recombination and CSR. NHEJ comprises core Ku70 and Ku80 subunits that form the Ku heterodimer, which binds DSBs and promotes the recruitment of accessory factors (e.g., DNA‐PKcs, Artemis, PAXX, MRI) and downstream core factors (XLF, Lig4 and XRCC4). In recent decades, new NHEJ proteins have been reported, increasing complexity of this molecular pathway. Numerous in vivo mouse models have been generated and characterized to identify the interplay of NHEJ factors and their role in development of adaptive immune system. This review summarizes the currently available mouse models lacking one or several NHEJ factors, with a particular focus on early B cell development. We also underline genetic interactions and redundancy in the NHEJ pathway in mice.

18 November 2020 in Preprints.org
Verified
Preprint
Open access
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Kalaiyarasi RagunathanKalaiyarasi Ragunathan
Kalaiyarasi Ragunathan
NUNikki Lyn Upfold
Nikki Lyn Upfold
Valentyn OksenychValentyn Oksenych
Valentyn Oksenych
Cancer-associated fibroblasts (CAF) form the basis of tumor microenvironment and possess immunomodulatory functions by interacting with other cells surrounding tumor, including T lymphocytes, macrophages, dendritic cells and natural killer cells. Ionizing radiation is a broadly-used method in radiotherapy to target tumors. In mammalian cells, ionizing radiation induces various types of DNA damages and DNA damage response. Being unspecific, radiotherapy affects all the cells in tumor microenvironment, including the tumor itself, CAFs and immune cells. CAFs are extremely radio-resistant and do not initiate apoptosis even at high doses of radiation. However, following radiation, CAFs become senescent and produce a distinct combination of immunoregulatory molecules. Radiosensitivity of immune cells varies depending on the cell type due to inefficient DNA repair in, for example, monocytes and granulocytes. In this minireview, we are summarizing recent findings on the interaction between CAF, ionizing radiation and immune cells in the tumor microenvironment.

25 February 2023 in Biomolecules
Verified
Journal Article
Open access
PDF file
NUNikki Lyn Upfold
Nikki Lyn Upfold
Pavlo PetakhPavlo Petakh
Pavlo Petakh
Oleksandr KamyshnyiOleksandr Kamyshnyi
Oleksandr Kamyshnyi
Valentyn OksenychValentyn Oksenych
Valentyn Oksenych
Autoimmune disorders and some types of blood cancer originate when B lymphocytes malfunction. In particular, when B cells produce antibodies recognizing the body’s proteins, it leads to various autoimmune disorders. Additionally, when B cells of various developmental stages transform into cancer cells, it results in blood cancers, including multiple myeloma, lymphoma, and leukemia. Thus, new methods of targeting B cells are required for various patient groups. Here, we used protein kinase inhibitors alectinib, brigatinib, ceritinib, crizotinib, entrectinib, and lorlatinib previously approved as drugs treating anaplastic lymphoma kinase (ALK)-positive lung cancer cells. We hypothesized that the same inhibitors will efficiently target leukocyte tyrosine kinase (LTK)-positive, actively protein-secreting mature B lymphocytes, including plasma cells. We isolated CD19-positive human B cells from the blood of healthy donors and used two alternative methods to stimulate cell maturation toward plasma cells. Using cell proliferation and flow cytometry assays, we found that ceritinib and entrectinib eliminate plasma cells from B cell populations. Alectinib, brigatinib, and crizotinib also inhibited B cell proliferation, while lorlatinib had no or limited effect on B cells. More generally, we concluded that several drugs previously developed to treat ALK-positive malignant cells can be also used to treat LTK-positive B cells.

16 May 2020 in Preprints.org
Verified
Preprint
Open access
Sergio Miguel Castaneda ZegarraSergio Miguel Castaneda Zegarra
Sergio Miguel Castaneda Zegarra
MFMarion Fernandez-Berrocal
Marion Fernandez-Berrocal
MTMax Tkachov
Max Tkachov
NUNikki Lyn Upfold
Nikki Lyn Upfold
Valentyn OksenychValentyn Oksenych
Valentyn Oksenych
The non-homologous end joining (NHEJ) DNA repair pathway is the main mechanism to repair DNA double strand breaks (DSBs) throughout the whole cell cycle. During NHEJ, core Ku70 and Ku80 subunits form the Ku heterodimer; Ku binds DSBs and promotes the recruitment of accessory factors (e.g., DNA-PKcs, PAXX, Mri) and downstream core factors (XLF, Lig4 and XRCC4). DSBs are induced during the V(D)J recombination in developing B and T lymphocytes to increase the repertoire of B and T cell receptors. Furthermore, DSBs are generated during the class switch recombination (CSR) in mature B lymphocytes, providing distinct effector functions of antibody heavy chain constant regions. The NHEJ is required for both V(D)J recombination and CSR. During the last decades, new NHEJ proteins have been reported, increasing the complexity of the molecular pathway. Multiple in vivo mouse models were generated and characterized to identify specific functions of NHEJ factors in the adaptive immune system. Here, we are summarizing available mouse models lacking one or several NHEJ factors, with a particular focus on early B cell development.

13 February 2026 in Biomolecules
Verified
Journal Article
Open access
PDF file
NUNikki Lyn Upfold
Nikki Lyn Upfold
Pavlo PetakhPavlo Petakh
Pavlo Petakh
AKAleksandr Kamyshnyi
Aleksandr Kamyshnyi
Valentyn OksenychValentyn Oksenych
Valentyn Oksenych
The journal retracts the article titled “Tyrosine Kinase Inhibitors Target B Lymphocytes”