Nima Sanati

Mr. Nima Sanati

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Research Focus & Metrics

Academic Career Length

2Years (2025-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 January 2025 in Cancers
Verified
Journal Article
Open access
PDF file
MSMohammad R. Salmanpour
Mohammad R. Salmanpour
AGArman Gorji
Arman Gorji
AMAmin Mousavi
Amin Mousavi
AJAli Fathi Jouzdani
Ali Fathi Jouzdani
Nima SanatiNima Sanati
Nima Sanati
ARArman Rahmim
Arman Rahmim
Objective: This study explores a semi-supervised learning (SSL), pseudo-labeled strategy using diverse datasets such as head and neck cancer (HNCa) to enhance lung cancer (LCa) survival outcome predictions, analyzing handcrafted and deep radiomic features (HRF/DRF) from PET/CT scans with hybrid machine learning systems (HMLSs). Methods: We collected 199 LCa patients with both PET and CT images, obtained from TCIA and our local database, alongside 408 HNCa PET/CT images from TCIA. We extracted 215 HRFs and 1024 DRFs by PySERA and a 3D autoencoder, respectively, within the ViSERA 1.0.0 software, from segmented primary tumors. The supervised strategy (SL) employed an HMLS–PCA connected with six classifiers on both HRFs and DRFs. The SSL strategy expanded the datasets by adding 408 pseudo-labeled HNCa cases (labeled by the Random Forest algorithm) to 199 LCa cases, using the same HMLS techniques. Furthermore, principal component analysis (PCA) linked with four survival prediction algorithms were utilized in the survival hazard ratio analysis. Results: The SSL strategy outperformed the SL method (p << 0.001), achieving an average accuracy of 0.85 ± 0.05 with DRFs from PET and PCA + Multi-Layer Perceptron (MLP), compared to 0.69 ± 0.06 for the SL strategy using DRFs from CT and PCA + Light Gradient Boosting (LGB). Additionally, PCA linked with Component-wise Gradient Boosting Survival Analysis on both HRFs and DRFs, as extracted from CT, had an average C-index of 0.80, with a log rank p-value << 0.001, confirmed by external testing. Conclusions: Shifting from HRFs and SL to DRFs and SSL strategies, particularly in contexts with limited data points, enabling CT or PET alone, can significantly achieve high predictive performance.

9 January 2026 in Physics in Medicine & Biology
Verified
Journal Article
Open access
AGArman Gorji
Arman Gorji
Nima SanatiNima Sanati
Nima Sanati
APAmir Hossein Pouria
Amir Hossein Pouria
SMSomayeh Sadat Mehrnia
Somayeh Sadat Mehrnia
IHIlker Hacihaliloglu
Ilker Hacihaliloglu
MSMohammad R. Salmanpour
Mohammad R. Salmanpour
Objective: Radiomics-based AI models show potential in breast cancer diagnosis but lack interpretability. This study bridges the gap between radiomic features (RF) and BI-RADS descriptors through a clinically interpretable framework. Methods: We developed a dual-dictionary approach. First, a Clinical Mapping Dictionary (CMD) was constructed by mapping 56 RFs to BI-RADS descriptors (shape, margin, internal enhancement) based on literature and expert review. Second, we applied this framework to a classification task to predict triple-negative (TNBC) versus non-TNBC subtypes using Dynamic Contrast-Enhanced MRI data from a multi-institutional cohort of 1,549 patients. We trained 27 machine learning classifiers with 27 feature selection methods. Using SHapley Additive exPlanations (SHAP), we interpreted the model's predictions and developed a Statistical Mapping Dictionary (SMD) for 51 RFs, not included in the CMD. Results: The best-performing model (Variance Inflation Factor feature selector+Extra Trees Classifier) achieved an average cross-validation accuracy of 0.83±0.02. Our dual-dictionary approach successfully translated predictive RFs into understandable clinical concepts. For example, higher values of 'Sphericity', corresponding to a round/oval shape, were predictive of TNBC. Similarly, lower values of 'Busyness', indicating more homogeneous internal enhancement, were also associated with TNBC, aligning with existing clinical observations. This framework confirmed known imaging biomarkers and identified novel, data-driven quantitative features. Conclusion: This study introduces a novel dual-dictionary framework (BM1.0) that bridges RFs and the BI-RADS clinical lexicon. By enhancing the interpretability and transparency of AI models, the framework supports greater clinical trust and paves the way for integrating RFs into breast cancer diagnosis and personalized care.