Pooja Khatkar

Dr. Pooja Khatkar

Vaccine Research Center, National Institutes of Health, Bethesda, Maryland, USA
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Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 April 2017 in The EMBO Journal
Verified
Journal Article
Closed access
PDF file
JWJordan Woodrick
Jordan Woodrick
SGSuhani Gupta
Suhani Gupta
SCSharon Camacho
Sharon Camacho
SPSwetha Parvathaneni
Swetha Parvathaneni
SCSujata Choudhury
Sujata Choudhury
RRRabindra Roy
Rabindra Roy

23 February 2021 in Retrovirology
Verified
Journal Article
Open access
PDF file
DPDaniel O. Pinto
Daniel O. Pinto
SSSarah Al Sharif
Sarah Al Sharif
GMGifty Mensah
Gifty Mensah
MCMaria Cowen
Maria Cowen
PKPooja Khatkar
Pooja Khatkar
Fatah KashanchiFatah Kashanchi
Fatah Kashanchi
Background: The Human T-cell Lymphotropic Virus Type-1 (HTLV-1) is a blood-borne pathogen and etiological agent of Adult T-cell Leukemia/Lymphoma (ATLL) and HTLV-1 Associated Myelopathy/Tropical Spastic Paraparesis (HAM/TSP). HTLV-1 has currently infected up to 10 million globally with highly endemic areas in Japan, Africa, the Caribbean and South America. We have previously shown that Extracellular Vesicles (EVs) enhance HTLV-1 transmission by promoting cell–cell contact. Results: Here, we separated EVs into subpopulations using differential ultracentrifugation (DUC) at speeds of 2 k (2000×g), 10 k (10,000×g), and 100 k (100,000×g) from infected cell supernatants. Proteomic analysis revealed that EVs contain the highest viral/host protein abundance in the 2 k subpopulation (2 k > 10 k > 100 k). The 2 k and 10 k populations contained viral proteins (i.e., p19 and Tax), and autophagy proteins (i.e., LC3 and p62) suggesting presence of autophagosomes as well as core histones. Interestingly, the use of 2 k EVs in an angiogenesis assay (mesenchymal stem cells + endothelial cells) caused deterioration of vascular-like-tubules. Cells commonly associated with the neurovascular unit (i.e., astrocytes, neurons, and macrophages) in the blood–brain barrier (BBB) showed that HTLV-1 EVs may induce expression of cytokines involved in migration (i.e., IL-8; 100 k > 2 k > 10 k) from astrocytes and monocyte-derived macrophages (i.e., IL-8; 2 k > 10 k). Finally, we found that EVs were able to promote cell–cell contact and viral transmission in monocytic cell-derived dendritic cell. The EVs from both 2 k and 10 k increased HTLV-1 spread in a humanized mouse model, as evidenced by an increase in proviral DNA and RNA in the Blood, Lymph Node, and Spleen. Conclusions: Altogether, these data suggest that various EV subpopulations induce cytokine expression, tissue damage, and viral spread.

24 July 2019 in Journal of Neuroimmune Pharmacology
Verified
Journal Article
Closed access
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HBHeather Branscome
Heather Branscome
SPSiddhartha Paul
Siddhartha Paul
PKPooja Khatkar
Pooja Khatkar
YKYuriy Kim
Yuriy Kim
RBRobert A. Barclay
Robert A. Barclay
Fatah KashanchiFatah Kashanchi
Fatah Kashanchi

18 February 2022 in Cells
Verified
Journal Article
Open access
PDF file
CDCatherine DeMarino
Catherine DeMarino
MCMaria Cowen
Maria Cowen
PKPooja Khatkar
Pooja Khatkar
BCBianca Cotto
Bianca Cotto
Heather BranscomeHeather Branscome
Heather Branscome
Fatah KashanchiFatah Kashanchi
Fatah Kashanchi
Of the 37.9 million individuals infected with human immunodeficiency virus type 1 (HIV-1), approximately 50% exhibit HIV-associated neurocognitive disorders (HAND). We and others previously showed that HIV-1 viral RNAs, such as trans-activating response (TAR) RNA, are incorporated into extracellular vesicles (EVs) and elicit an inflammatory response in recipient naïve cells. Cannabidiol (CBD) and Δ9-tetrahydrocannabinol (THC), the primary cannabinoids present in cannabis, are effective in reducing inflammation. Studies show that cannabis use in people living with HIV-1 is associated with lower viral load, lower circulating CD16+ monocytes and high CD4+ T-cell counts, suggesting a potentially therapeutic application. Here, HIV-1 infected U1 monocytes and primary macrophages were used to assess the effects of CBD. Post-CBD treatment, EV concentrations were analyzed using nanoparticle tracking analysis. Changes in intracellular and EV-associated viral RNA were quantified using RT-qPCR, and changes in viral proteins, EV markers, and autophagy proteins were assessed by Western blot. Our data suggest that CBD significantly reduces the number of EVs released from infected cells and that this may be mediated by reducing viral transcription and autophagy activation. Therefore, CBD may exert a protective effect by alleviating the pathogenic effects of EVs in HIV-1 and CNS-related infections.

1 April 2021 in Cells
Verified
Journal Article
Open access
PDF file
YKYuriy Kim
Yuriy Kim
GMGifty A. Mensah
Gifty A. Mensah
SASarah Alsharif
Sarah Alsharif
DPDaniel O. Pinto
Daniel O. Pinto
Heather BranscomeHeather Branscome
Heather Branscome
Fatah KashanchiFatah Kashanchi
Fatah Kashanchi
Here, we have attempted to address the timing of EV and virion release from virally infected cells. Uninfected (CEM), HIV-1-infected (J1.1), and human T cell leukemia virus-1 (HTLV-1)-infected (HUT102) cells were synchronized in G0. Viral latency was reversed by increasing gene expression with the addition of serum-rich media and inducers. Supernatants and cell pellets were collected post-induction at different timepoints and assayed for extracellular vesicle (EV) and autophagy markers; and for viral proteins and RNAs. Tetraspanins and autophagy-related proteins were found to be differentially secreted in HIV-1- and HTLV-1-infected cells when compared with uninfected controls. HIV-1 proteins were present at 6 h and their production increased up to 24 h. HTLV-1 proteins peaked at 6 h and plateaued. HIV-1 and HTLV-1 RNA production correlated with viral protein expression. Nanoparticle tracking analysis (NTA) showed increase of EV concentration over time in both uninfected and infected samples. Finally, the HIV-1 supernatant from the 6-h samples was found not to be infectious; however, the virus from the 24-h samples was successfully rescued and infectious. Overall, our data indicate that EV release may occur prior to viral release from infected cells, thereby implicating a potentially significant effect of EVs on uninfected recipient cells prior to subsequent viral infection and spread.

10 December 2020 in Viruses
Verified
Journal Article
Open access
PDF file
SASarah Alsharif
Sarah Alsharif
DPDaniel O. Pinto
Daniel O. Pinto
GMGifty A. Mensah
Gifty A. Mensah
FDFatemeh Dehbandi
Fatemeh Dehbandi
PKPooja Khatkar
Pooja Khatkar
Fatah KashanchiFatah Kashanchi
Fatah Kashanchi
Human T-cell lymphotropic virus type 1 (HTLV-1) infects 5–10 million people worldwide and is the causative agent of adult T-cell leukemia/lymphoma (ATLL) and HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP) as well as other inflammatory diseases. A major concern is that the most majority of individuals with HTLV-1 are asymptomatic carriers and that there is limited global attention by health care officials, setting up potential conditions for increased viral spread. HTLV-1 transmission occurs primarily through sexual intercourse, blood transfusion, intravenous drug usage, and breast feeding. Currently, there is no cure for HTLV-1 infection and only limited treatment options exist, such as class I interferons (IFN) and Zidovudine (AZT), with poor prognosis. Recently, small membrane-bound structures, known as extracellular vesicles (EVs), have received increased attention due to their potential to carry viral cargo (RNA and proteins) in multiple pathogenic infections (i.e., human immunodeficiency virus type I (HIV-1), Zika virus, and HTLV-1). In the case of HTLV-1, EVs isolated from the peripheral blood and cerebral spinal fluid (CSF) of HAM/TSP patients contained the viral transactivator protein Tax. Additionally, EVs derived from HTLV-1-infected cells (HTLV-1 EVs) promote functional effects such as cell aggregation which enhance viral spread. In this review, we present current knowledge surrounding EVs and their potential role as immune-modulating agents in cancer and other infectious diseases such as HTLV-1 and HIV-1. We discuss various features of EVs that make them prime targets for possible vehicles of future diagnostics and therapies.