Pectobacterium strains isolated from potato stems in Finland, Poland and the Netherlands were subjected to polyphasic analyses to characterize their genomic and phenotypic features. Phylogenetic analysis based on 382 core proteins showed that the isolates clustered closest to Pectobacterium polaris but could be divided into two clades. Average nucleotide identity (ANI) analysis revealed that the isolates in one of the clades included the P. polaris type strain, whereas the second clade was at the border of the species P. polaris with a 96 % ANI value. In silico genome-to-genome comparisons between the isolates revealed values below 70%, patristic distances based on 1294 core proteins were at the level observed between closely related Pectobacterium species, and the two groups of bacteria differed in genome size, G+C content and results of amplified fragment length polymorphism and Biolog analyses. Comparisons between the genomes revealed that the isolates of the atypical group contained SPI-1-type Type III secretion island and genes coding for proteins known for toxic effects on nematodes or insects, and lacked many genes coding for previously characterized virulence determinants affecting rotting of plant tissue by soft rot bacteria. Furthermore, the atypical isolates could be differentiated from P. polaris by their low virulence, production of antibacterial metabolites and a citrate-negative phenotype. Based on the results of a polyphasic approach including genome-to-genome comparisons, biochemical and virulence assays, presented in this report, we propose delineation of the atypical isolates as a novel species Pectobacterium parvum, for which the isolate s0421^T (CFBP 8630^T=LMG 30828^T) is suggested as a type strain.

Bacterial soft rot is a globally significant plant disease that causes major losses in the production of many popular crops, such as potato. Little is known about the dispersal and ecology of soft‐rot enterobacteria, and few animals have been identified as vectors for these pathogens. This study investigates whether soil‐living and bacterial‐feeding nematodes could act as vectors for the dispersal of soft‐rot enterobacteria to plants. Soft‐rot enterobacteria associated with nematodes were quantified and visualized through bacterial enumeration, GFP ‐tagging, and confocal and electron scanning microscopy. Soft‐rot enterobacteria were able to withstand nematode grazing, colonize the gut of Caenorhabditis elegans and subsequently disperse to plant material while remaining virulent. Two nematode species were also isolated from a rotten potato sample obtained from a potato storage facility in Finland. Furthermore, one of these isolates ( Pristionchus sp. FIN ‐1) was shown to be able to disperse soft‐rot enterobacteria to plant material. The interaction of nematodes and soft‐rot enterobacteria seems to be more mutualistic rather than pathogenic, but more research is needed to explain how soft‐rot enterobacteria remain viable inside nematodes.

Sustainable agricultural practices are essential for eradicating global hunger, especially in light of the growing world population. Utilizing natural antagonists, such as fungi and bacteria, to combat plant diseases, rather than relying solely on synthetic chemical pesticides, which pose significant risks to the environment and human health, is known as biocontrol. Microbial biological control agents (MBCAs) have proven effective against phytopathogens and are increasingly embraced in agricultural practices. MBCAs possess several beneficial traits, including antagonistic potential, rhizosphere competence, and the ability to produce lytic enzymes, antibiotics, and toxins. These biocontrol mechanisms directly target soil-borne pathogens or indirectly stimulate a plant-mediated resistance response. The effectiveness of MBCAs in managing plant diseases depends on various mechanisms, such as hyperparasitism, antibiosis, competition for nutrients or space, disruption of quorum-sensing signals, production of siderophores, generation of cell wall-degrading enzymes, and the induction and priming of plant resistance. Formulating effective biopesticides requires optimal conditions, including selecting effective strains, considering biosafety, appropriate storage methods, and ensuring a prolonged shelf life. Therefore, formulation is crucial in developing pesticide products, particularly concerning efficacy and production costs. However, several challenges must be addressed to ensure the successful application of biological control, including the shelf life of biopesticides, slower efficacy in pest management, inadequate awareness and understanding of biocontrol methods, regulatory registration for commercialization, and suitable agricultural applications. This review clarifies the principles of plant disease biocontrol, highlighting the mechanisms of action and functionality of MBCAs in biocontrol activities, the formulation of biopesticides derived from microorganisms, and the challenges and barriers associated with the development, registration, commercialization, and application of biopesticides.

The protection of persimmon fruits (Diospyros kaki L.) from postharvest fungal infestation with Alternaria alternata (A. alternate; black rot) is a major agricultural and economic demand worldwide. Edible coatings (ECs) based on biopolymers and phytocompounds were proposed to maintain fruit quality, especially with nanomaterials’ applications. Chitosan nanoparticles (NCt), rosmarinic acid bio-mediated selenium nanoparticles (RA/SeNPs) and their composites were produced, characterized and evaluated as ECs for managing persimmon black rot. The constructed NCt, RA/SeNPs and NCt/RA/SeNPs composite had diminished particles’ size diameters. The ECs solution of 1% NCt and NCt/RA/SeNPs composite led to a significant reduction of A. alternata radial growth in vitro, with 77.4 and 97.2%, respectively. The most powerful ECs formula contained 10 mg/mL from NCt/RA/SeNPs composite, which significantly reduced fungal growth than imazalil fungicide. The coating of persimmon with nanoparticles-based ECs resulted in a significant reduction of black rot disease severity and incidence in artificially infected fruits; the treatment with 1% of NCt/RA/SeNPs could completely (100%) hinder disease incidence and severity in coated fruits, whereas imazalil reduced them by 88.6 and 73.4%, respectively. The firmness of fruits is greatly augmented after ECs treatments, particularly with formulated coatings with 1% NCt/RA/SeNPs composite, which maintain fruits firmness by 85.7%. The produced ECs in the current study, based on NCt/RA/SeNPs composite, are greatly recommended as innovatively constructed human-friendly matrix to suppress the postharvest destructive fungi (A. alternata) and maintain the shelf-life and quality of persimmon fruits.

Experiments were conducted to investigate the effect of Arthrobotrys oligospora against Meloidogyne incognita infecting tomato plants. Effect of A. oligospora on capture of M. incognita juveniles and the trapping rate in–vitro were calculated. Different density of A. oligospora i.e.1, 3 and 5% of soil weight used to evaluate its effect on nematodes and plant growth parameters of tomato plants under green-house conditions. Data showed that the A. oligospora formed adhesive, three-dimensional networks and the trapping organs have the ability to trap the second stage juveniles of M. Incognita. In-vitro test was carried out by exposing the nematode juveniles to A. oligospora culture at 24, 48 and 72 hours. The trapping rate of juveniles by the trapping organs increased by increasing the exposure time at (72 hours). Results of in-vitro test showed significant reduction in nematode criteria comparing to the untreated control. Tomato growth parameters were also significantly enhanced.Thus; the present study showed the possibility of using A. oligospora as a bio-control agent to root-knot nematode, M. incognita.