Shinsuke Shibata

Prof. Shinsuke Shibata

Department of Physiology, Keio University School of Medicine
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orcid

Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 July 2021 in Nature
Verified
Journal Article
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YSYuko Sato
Yuko Sato
KAKoji Atarashi
Koji Atarashi
DPDamian R. Plichta
Damian R. Plichta
YAYasumichi Arai
Yasumichi Arai
SSSatoshi Sasajima
Satoshi Sasajima
KHKenya Honda
Kenya Honda

22 June 2017 in Nature Communications
Verified
Journal Article
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YMYosuke M. Morizawa
Yosuke M. Morizawa
YHYuri Hirayama
Yuri Hirayama
NONobuhiko Ohno
Nobuhiko Ohno
SSShinsuke Shibata
Shinsuke Shibata
ESEiji Shigetomi
Eiji Shigetomi
Schuichi KoizumiSchuichi Koizumi
Schuichi Koizumi
Astrocytes become reactive following various brain insults; however, the functions of reactive astrocytes are poorly understood. Here, we show that reactive astrocytes function as phagocytes after transient ischemic injury and appear in a limited spatiotemporal pattern. Following transient brain ischemia, phagocytic astrocytes are observed within the ischemic penumbra region during the later stage of ischemia. However, phagocytic microglia are mainly observed within the ischemic core region during the earlier stage of ischemia. Phagocytic astrocytes upregulate ABCA1 and its pathway molecules, MEGF10 and GULP1, which are required for phagocytosis, and upregulation of ABCA1 alone is sufficient for enhancement of phagocytosis in vitro. Disrupting ABCA1 in reactive astrocytes result in fewer phagocytic inclusions after ischemia. Together, these findings suggest that astrocytes are transformed into a phagocytic phenotype as a result of increase in ABCA1 and its pathway molecules and contribute to remodeling of damaged tissues and penumbra networks.

16 May 2016 in Nature Genetics
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Journal Article
Closed access
SNSatoshi Narumi
Satoshi Narumi
NANaoko Amano
Naoko Amano
Tomohiro IshiiTomohiro Ishii
Tomohiro Ishii
NKNoriyuki Katsumata
Noriyuki Katsumata
KMKoji Muroya
Koji Muroya
THTomonobu Hasegawa
Tomonobu Hasegawa

1 January 2013 in Molecular Brain
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Journal Article
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YNYoshinori Nishimoto
Yoshinori Nishimoto
Shinichi NakagawaShinichi Nakagawa
Shinichi Nakagawa
THTetsuro Hirose
Tetsuro Hirose
HOHirotaka James Okano
Hirotaka James Okano
MTMasaki Takao
Masaki Takao
Hideyuki OkanoHideyuki Okano
Hideyuki Okano
A long non-coding RNA (lncRNA), nuclear-enriched abundant transcript 1_2 (NEAT1_2), constitutes nuclear bodies known as “paraspeckles”. Mutations of RNA binding proteins, including TAR DNA-binding protein-43 (TDP-43) and fused in sarcoma/translocated in liposarcoma (FUS/TLS), have been described in amyotrophic lateral sclerosis (ALS). ALS is a devastating motor neuron disease, which progresses rapidly to a total loss of upper and lower motor neurons, with consciousness sustained. The aim of this study was to clarify the interaction of paraspeckles with ALS-associated RNA-binding proteins, and to identify increased occurrence of paraspeckles in the nucleus of ALS spinal motor neurons.

6 June 2016 in Nature
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Journal Article
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RFRaymond G. Fox
Raymond G. Fox
NLNikki K. Lytle
Nikki K. Lytle
DJDawn V. Jaquish
Dawn V. Jaquish
FPFrederick D. Park
Frederick D. Park
TITakahiro Ito
Takahiro Ito
TRTannishtha Reya
Tannishtha Reya
The stem cell determinant Musashi (Msi) is a key mediator of pancreatic cancer progression and therapy resistance. Targeting premalignant pancreatic lesions before they progress to pancreatic ductal adenocarcinoma is challenging. Tannishtha Reya and colleagues have found that the stem cell factor encoding for the RNA-binding protein Musashi (Msi) is critical to this progression in genetic mouse models and patient-derived xenografts. They used an image-based approach to follow the cells as they progress to malignancy, and show that the growth of pancreatic tumours can be halted by targeting Msi with antisense oligonucleotides. Pancreatic intraepithelial neoplasia is a pre-malignant lesion that can progress to pancreatic ductal adenocarcinoma, a highly lethal malignancy marked by its late stage at clinical presentation and profound drug resistance1. The genomic alterations that commonly occur in pancreatic cancer include activation of KRAS2 and inactivation of p53 and SMAD4 (refs 2, 3, 4). So far, however, it has been challenging to target these pathways therapeutically; thus the search for other key mediators of pancreatic cancer growth remains an important endeavour. Here we show that the stem cell determinant Musashi (Msi) is a critical element of pancreatic cancer progression both in genetic models and in patient-derived xenografts. Specifically, we developed Msi reporter mice that allowed image-based tracking of stem cell signals within cancers, revealing that Msi expression rises as pancreatic intraepithelial neoplasia progresses to adenocarcinoma, and that Msi-expressing cells are key drivers of pancreatic cancer: they preferentially harbour the capacity to propagate adenocarcinoma, are enriched in circulating tumour cells, and are markedly drug resistant. This population could be effectively targeted by deletion of either Msi1 or Msi2, which led to a striking defect in the progression of pancreatic intraepithelial neoplasia to adenocarcinoma and an improvement in overall survival. Msi inhibition also blocked the growth of primary patient-derived tumours, suggesting that this signal is required for human disease. To define the translational potential of this work we developed antisense oligonucleotides against Msi; these showed reliable tumour penetration, uptake and target inhibition, and effectively blocked pancreatic cancer growth. Collectively, these studies highlight Msi reporters as a unique tool to identify therapy resistance, and define Msi signalling as a central regulator of pancreatic cancer.

24 January 2020 in Nature Communications
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Journal Article
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HTHikari Tanaka
Hikari Tanaka
HHHidenori Homma
Hidenori Homma
KFKyota Fujita
Kyota Fujita
KKKanoh Kondo
Kanoh Kondo
SYShingo Yamada
Shingo Yamada
HOhitoshi okazawa
hitoshi okazawa
The timing and characteristics of neuronal death in Alzheimer’s disease (AD) remain largely unknown. Here we examine AD mouse models with an original marker, myristoylated alanine-rich C-kinase substrate phosphorylated at serine 46 (pSer46-MARCKS), and reveal an increase of neuronal necrosis during pre-symptomatic phase and a subsequent decrease during symptomatic phase. Postmortem brains of mild cognitive impairment (MCI) rather than symptomatic AD patients reveal a remarkable increase of necrosis. In vivo imaging reveals instability of endoplasmic reticulum (ER) in mouse AD models and genome-edited human AD iPS cell-derived neurons. The level of nuclear Yes-associated protein (YAP) is remarkably decreased in such neurons under AD pathology due to the sequestration into cytoplasmic amyloid beta (Aβ) aggregates, supporting the feature of YAP-dependent necrosis. Suppression of early-stage neuronal death by AAV-YAPdeltaC reduces the later-stage extracellular Aβ burden and cognitive impairment, suggesting that preclinical/prodromal YAP-dependent neuronal necrosis represents a target for AD therapeutics.