Silvia Parapini

Prof. Dr. Silvia Parapini

University of Milan
orcid

Research Focus & Metrics

Academic Career Length

28Years (1999-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 July 2016 in PLOS Pathogens
Verified
Journal Article
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WVWesley C Van Voorhis
Wesley C Van Voorhis
JAJohn H Adams
John H Adams
RARoberto Adelfio
Roberto Adelfio
VAVida Ahyong
Vida Ahyong
MAMyles H Akabas
Myles H Akabas
PWPaul A Willis
Paul A Willis
A major cause of the paucity of new starting points for drug discovery is the lack of interaction between academia and industry. Much of the global resource in biology is present in universities, whereas the focus of medicinal chemistry is still largely within industry. Open source drug discovery, with sharing of information, is clearly a first step towards overcoming this gap. But the interface could especially be bridged through a scale-up of open sharing of physical compounds, which would accelerate the finding of new starting points for drug discovery. The Medicines for Malaria Venture Malaria Box is a collection of over 400 compounds representing families of structures identified in phenotypic screens of pharmaceutical and academic libraries against the Plasmodium falciparum malaria parasite. The set has now been distributed to almost 200 research groups globally in the last two years, with the only stipulation that information from the screens is deposited in the public domain. This paper reports for the first time on 236 screens that have been carried out against the Malaria Box and compares these results with 55 assays that were previously published, in a format that allows a meta-analysis of the combined dataset. The combined biochemical and cellular assays presented here suggest mechanisms of action for 135 (34%) of the compounds active in killing multiple life-cycle stages of the malaria parasite, including asexual blood, liver, gametocyte, gametes and insect ookinete stages. In addition, many compounds demonstrated activity against other pathogens, showing hits in assays with 16 protozoa, 7 helminths, 9 bacterial and mycobacterial species, the dengue fever mosquito vector, and the NCI60 human cancer cell line panel of 60 human tumor cell lines. Toxicological, pharmacokinetic and metabolic properties were collected on all the compounds, assisting in the selection of the most promising candidates for murine proof-of-concept experiments and medicinal chemistry programs. The data for all of these assays are presented and analyzed to show how outstanding leads for many indications can be selected. These results reveal the immense potential for translating the dispersed expertise in biological assays involving human pathogens into drug discovery starting points, by providing open access to new families of molecules, and emphasize how a small additional investment made to help acquire and distribute compounds, and sharing the data, can catalyze drug discovery for dozens of different indications. Another lesson is that when multiple screens from different groups are run on the same library, results can be integrated quickly to select the most valuable starting points for subsequent medicinal chemistry efforts. Malaria leads to the loss of over 440,000 lives annually; accelerating research to discover new candidate drugs is a priority. Medicines for Malaria Venture (MMV) has distilled over 25,000 compounds that kill malaria parasites in vitro into a group of 400 representative compounds, called the "Malaria Box". These Malaria Box sets were distributed free-of-charge to research laboratories in 30 different countries that work on a wide variety of pathogens. Fifty-five groups compiled >290 assay results for this paper describing the many activities of the Malaria Box compounds. The collective results suggest a potential mechanism of action for over 130 compounds against malaria and illuminate the most promising compounds for further malaria drug development research. Excitingly some of these compounds also showed outstanding activity against other disease agents including fungi, bacteria, other single-cellular parasites, worms, and even human cancer cells. The results have ignited over 30 drug development programs for a variety of diseases. This open access effort was so successful that MMV has begun to distribute another set of compounds with initial activity against a wider range of infectious agents that are of public health concern, called the Pathogen Box, available now to scientific labs all over the world (www.PathogenBox.org).

29 June 2002 in Journal of Medicinal Chemistry
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Journal Article
Closed access
CKCatherine H. Kaschula
Catherine H. Kaschula
TETimothy J. Egan
Timothy J. Egan
RHRoger Hunter
Roger Hunter
NBNicoletta Basilico
Nicoletta Basilico
SPSilvia Parapini
Silvia Parapini
DMDiego Monti
Diego Monti

1 November 2004 in Phytochemistry
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Journal Article
Closed access
Luisella VerottaLuisella Verotta
Luisella Verotta
ELErminio Lovaglio
Erminio Lovaglio
GVGiovanni Vidari
Giovanni Vidari
PFPaola Vita Finzi
Paola Vita Finzi
MNMaria Grazia Neri
Maria Grazia Neri
EBEzio Bombardelli
Ezio Bombardelli

26 September 2007 in ChemMedChem
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Journal Article
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Richard K. HaynesRichard K. Haynes
Richard K. Haynes
WCWing Chi Chan
Wing Chi Chan
CLChung‐Man Lung
Chung‐Man Lung
AUAnne‐Catrin Uhlemann
Anne‐Catrin Uhlemann
UEUrsula Eckstein
Ursula Eckstein
SKSanjeev Krishna
Sanjeev Krishna

3 May 2013 in Journal of Antimicrobial Chemotherapy
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Journal Article
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SDSarah D'Alessandro
Sarah D'Alessandro
FSFrancesco Silvestrini
Francesco Silvestrini
KDKoen Dechering
Koen Dechering
YCYolanda Corbett
Yolanda Corbett
SPSilvia Parapini
Silvia Parapini
Donatella TaramelliDonatella Taramelli
Donatella Taramelli
Objectives Plasmodium gametocytes, responsible for malaria parasite transmission from humans to mosquitoes, represent a crucial target for new antimalarial drugs to achieve malaria elimination/eradication. We developed a novel colorimetric screening method for anti-gametocyte compounds based on the parasite lactate dehydrogenase (pLDH) assay, already standardized for asexual stages, to measure gametocyte viability and drug susceptibility. Methods Gametocytogenesis of 3D7 and NF54 Plasmodium falciparum strains was induced in vitro and asexual parasites were depleted with N-acetylglucosamine. Gametocytes were treated with dihydroartemisinin, epoxomicin, methylene blue, primaquine, puromycin or chloroquine in 96-well plates and the pLDH activity was evaluated using a modified Makler protocol. Mosquito infectivity was measured by the standard membrane feeding assay (SMFA). Results A linear correlation was found between gametocytaemia determined by Giemsa staining and pLDH activity. A concentration-dependent reduction in pLDH activity was observed after 72 h of drug treatment, whereas an additional 72 h of incubation without drugs was required to obtain complete inhibition of gametocyte viability. SMFA on treated and control gametocytes confirmed that a reduction in pLDH activity translates into reduced oocyst development in the mosquito vector. Conclusions The gametocyte pLDH assay is fast, easy to perform, cheap and reproducible and is suitable for screening novel transmission-blocking compounds, which does not require parasite transgenic lines.

1 December 2000 in Experimental Parasitology
Verified
Journal Article
Closed access
SPSilvia Parapini
Silvia Parapini
NBNicoletta Basilico
Nicoletta Basilico
EPErica Pasinib
Erica Pasinib
TETimothy J Egan
Timothy J Egan
POPiero Olliarod
Piero Olliarod
DMDiego Montib
Diego Montib