Samuel Stuart McAfee

Dr. Samuel Stuart McAfee

Radiology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA
orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 January 2017 in Frontiers in Neural Circuits
Verified
Journal Article
Open access
PDF file
DHDetlef H. Heck
Detlef H. Heck
Samuel Stuart McAfeeSamuel Stuart McAfee
Samuel Stuart McAfee
YLYu Liu
Yu Liu
ABAbbas Babajani-Feremi
Abbas Babajani-Feremi
RRRoozbeh Rezaie
Roozbeh Rezaie
RKRobert Kozma
Robert Kozma
Ongoing fluctuations of neuronal activity have long been considered intrinsic noise that introduces unavoidable and unwanted variability into neuronal processing, which the brain eliminates by averaging across population activity (Georgopoulos et al., 1986;Lee et al., 1988;Shadlen and Newsome, 1994;Maynard et al., 1999). It is now understood, that the seemingly random fluctuations of cortical activity form highly structured patterns, including oscillations at various frequencies, that modulate evoked neuronal responses (Arieli et al., 1996;Poulet and Petersen, 2008;He, 2013) and affect sensory perception (Linkenkaer-Hansen et al., 2004;Boly et al., 2007;Sadaghiani et al., 2009;Vinnik et al., 2012;Palva et al., 2013). Ongoing cortical activity is driven by proprioceptive and interoceptive inputs. In addition, it is partially intrinsically generated in which case it may be related to mental processes (Fox and Raichle, 2007;Deco et al., 2011). Here we argue that respiration, via multiple sensory pathways, contributes a rhythmic component to ongoing cortical activity. We suggest that this rhythmic activity modulates the temporal organization of cortical neurodynamics, thereby linking higher cortical functions to the process of breathing.

21 August 2017 in Scientific Reports
Verified
Journal Article
Open access
PDF file
YLYu Liu
Yu Liu
Samuel Stuart McAfeeSamuel Stuart McAfee
Samuel Stuart McAfee
DHDetlef H. Heck
Detlef H. Heck
Several recent studies have shown that respiration modulates oscillatory neuronal activity in the neocortex and hippocampus on a cycle-by-cycle basis. It was suggested that this respiratory influence on neuronal activity affects cognitive functions, including memory. Sharp-wave ripples (SWRs) are high-frequency local field potential activity patterns characteristic for the hippocampus and implicated in memory consolidation and recall. Here we show that the timing of SWR events is modulated by the respiratory cycle, with a significantly increased probability of SWRs during the early expiration phase. This influence of respiration on SWR occurrence was eliminated when olfactory bulb activity was inhibited. Our findings represent a possible neuronal mechanism for a direct influence of the respiratory cycle on memory function.

1 May 2019 in Cell Reports
Verified
Journal Article
Open access
Samuel Stuart McAfeeSamuel Stuart McAfee
Samuel Stuart McAfee
YLYu Liu
Yu Liu
RSRoy V. Sillitoe
Roy V. Sillitoe
DHDetlef H. Heck
Detlef H. Heck
The cerebellum has long been implicated in tasks involving precise temporal control, especially in the coordination of movements. Here we asked whether the cerebellum represents temporal aspects of oscillatory neuronal activity, measured as instantaneous phase and difference between instantaneous phases of oscillations in two cerebral cortical areas involved in cognitive function. We simultaneously recorded Purkinje cell (PC) single-unit spike activity in cerebellar lobulus simplex (LS) and Crus I and local field potential (LFP) activity in the medial prefrontal cortex (mPFC) and dorsal hippocampus CA1 region (dCA1). Purkinje cells in cerebellar LS and Crus I differentially represented specific phases and phase differences of mPFC and dCA1 LFP oscillations in a frequency-specific manner, suggesting a site- and frequency-specific cerebellar representation of temporal aspects of neuronal oscillations in non-motor cerebral cortical areas. These findings suggest that cerebellar interactions with cerebral cortical areas involved in cognitive functions might involve temporal coordination of neuronal oscillations.

1 April 2016 in Journal of Neuroscience Methods
Verified
Journal Article
Closed access
Samuel Stuart McAfeeSamuel Stuart McAfee
Samuel Stuart McAfee
MOMary Cameron Ogg
Mary Cameron Ogg
JRJordan M. Ross
Jordan M. Ross
YLYu Liu
Yu Liu
MFMax L. Fletcher
Max L. Fletcher
DHDetlef H. Heck
Detlef H. Heck

5 July 2022 in Neuro-Oncology
Verified
Journal Article
Closed access
PDF file
Samuel Stuart McAfeeSamuel Stuart McAfee
Samuel Stuart McAfee
SZSilu Zhang
Silu Zhang
PZPing Zou
Ping Zou
HCHeather M Conklin
Heather M Conklin
DRDarcy Raches
Darcy Raches
MSMatthew A Scoggins
Matthew A Scoggins
Background: Pediatric postoperative cerebellar mutism syndrome (CMS) is a rare but well-known complication of medulloblastoma (Mb) resection with devastating effects on expressive language, mobility, cognition, and emotional regulation that diminishes quality of life for many Mb survivors. The specific anatomical and neuronal basis of CMS remains obscure. We address this issue by identifying patterns of surgical damage and secondary axonal degeneration in Mb survivors with CMS. Methods: Children with Mb deemed high risk for CMS based on intraventricular location of the tumor had T1 images analyzed for location(s) of surgical damage using a specially developed algorithm. We used three complementary methods of spatial analysis to identify surgical damage linked to CMS diagnosis. Magnetization transfer ratio (MTR) images were analyzed for evidence of demyelination in anatomic regions downstream of the cerebellum, indicating neuronal dysfunction. Results: Spatial analyses highlighted damage to the fastigial nuclei and their associated cerebellar cortices as the strongest predictors of CMS. CMS-related MTR decrease was greatest in the ventral periaqueductal gray (PAG) area and highly consistent in the left red nucleus. Conclusion: Our evidence points to disruption of output from the fastigial nuclei as a likely causal trigger for CMS. We propose that core CMS symptoms result from a disruption in the triggering of survival behaviors regulated by the PAG, including the gating of vocalization and volitional movement. The fastigial nuclei provide the densest output to the PAG from the cerebellum, thus sparing these structures may provide a greater likelihood of CMS prevention.

16 April 2016 in bioRxiv
Verified
Preprint
Open access
PDF file
DHDetlef H. Heck
Detlef H. Heck
Samuel Stuart McAfeeSamuel Stuart McAfee
Samuel Stuart McAfee
YLYu Liu
Yu Liu
ABAbbas Babajani-Feremi
Abbas Babajani-Feremi
RRRoozbeh Rezaie
Roozbeh Rezaie
RKRobert Kozma
Robert Kozma
Summary: The brain generates oscillatory neuronal activity at a broad range of frequencies and the presence and amplitude of certain oscillations at specific times and in specific brain regions are highly correlated with states of arousal, sleep, and with a wide range of cognitive processes. The neuronal mechanisms underlying the generation of brain rhythms are poorly understood, particularly for low-frequency oscillations. We recently reported that respiration-locked olfactory bulb activity causes delta band (0.5-4 Hz) oscillatory neuronal activity in the whisker sensory (barrel) cortex in mice. Furthermore, gamma oscillations (30 – 100Hz), which are widely implicated in cognitive processing, were power-modulated in synchrony with the respiratory rhythm. These findings link afferent sensory activity caused by respiration directly to cortical rhythms associated with cognitive functions. Here we review the related literature and present new evidence to propose that respiration has a direct influence on oscillatory cortical activity, including gamma oscillations, and on transitions between synchronous and asynchronous cortical network states (marked by phase transitions). Oscillatory cortical activity, as well as phase transitions, has been implicated in cognitive functions, potentially linking respiratory phase to cognitive processing. We further argue that respiratory influence on cortical activity is present in most, and possibly in all areas of the neocortex in mice and humans. We furthermore suggest that respiration had a role in modulating cortical rhythms from early mammalian evolution. Early mammals relied strongly on their olfactory sense and had proportionately large olfactory bulbs. We propose that to this day the respiratory rhythm remains an integral element of dynamic cortical activity in mammals. We argue that breathing modulates all cortical functions, including cognitive and emotional processes, which could elucidate the well-documented but largely unexplained effects of respiratory exercises on mood and cognitive function.