Tram Thi Thu Nguyen

Ms. Tram Thi Thu Nguyen

Department of Plant & Environmental New Resources, Kyunghee University, Suwon, Gyeonggi, Republic of Korea
orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Journal Article
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Tram Thi Thu NguyenTram Thi Thu Nguyen
Tram Thi Thu Nguyen
EBEun-Kyung Bae
Eun-Kyung Bae
TATran Thi Ngoc Anh
Tran Thi Ngoc Anh
HLHyoshin Lee
Hyoshin Lee
Jae-Heung KoJae-Heung Ko
Jae-Heung Ko
Forests, comprising 31% of the Earth’s surface, play pivotal roles in regulating the carbon, water, and energy cycles. Despite being far less diverse than angiosperms, gymnosperms account for over 50% of the global woody biomass production. To sustain growth and development, gymnosperms have evolved the capacity to sense and respond to cyclical environmental signals, such as changes in photoperiod and seasonal temperature, which initiate growth (spring and summer) and dormancy (fall and winter). Cambium, the lateral meristem responsible for wood formation, is reactivated through a complex interplay among hormonal, genetic, and epigenetic factors. Temperature signals perceived in early spring induce the synthesis of several phytohormones, including auxins, cytokinins, and gibberellins, which in turn reactivate cambium cells. Additionally, microRNA-mediated genetic and epigenetic pathways modulate cambial function. As a result, the cambium becomes active during the summer, resulting in active secondary xylem (i.e., wood) production, and starts to become inactive in autumn. This review summarizes and discusses recent findings regarding the climatic, hormonal, genetic, and epigenetic regulation of wood formation in gymnosperm trees (i.e., conifers) in response to seasonal changes.

26 August 2023 in Genes
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Tram Thi Thu NguyenTram Thi Thu Nguyen
Tram Thi Thu Nguyen
MKMin-Ha Kim
Min-Ha Kim
EPEung-Jun Park
Eung-Jun Park
HLHyoshin Lee
Hyoshin Lee
Jae-Heung KoJae-Heung Ko
Jae-Heung Ko
Wood is the most important renewable resource not only for numerous practical utilizations but also for mitigating the global climate crisis by sequestering atmospheric carbon dioxide. The compressed wood (CW) of gymnosperms, such as conifers, plays a pivotal role in determining the structure of the tree through the reorientation of stems displaced by environmental forces and is characterized by a high content of lignin. Despite extensive studies on many genes involved in wood formation, the molecular mechanisms underlying seasonal and, particularly, CW formation remain unclear. This study examined the seasonal dynamics of two wood tissue types in Pinus densiflora: CW and opposite wood (OW). RNA sequencing of developing xylem for two consecutive years revealed comprehensive transcriptome changes and unique differences in CW and OW across seasons. During growth periods, such as spring and summer, we identified 2255 transcripts with differential expression in CW, with an upregulation in lignin biosynthesis genes and significant downregulation in stress response genes. Notably, among the laccases critical for monolignol polymerization, PdeLAC17 was found to be specifically expressed in CW, suggesting its vital role in CW formation. PdeERF4, an ERF transcription factor preferentially expressed in CW, seems to regulate PdeLAC17 activity. This research provides an initial insight into the transcriptional regulation of seasonal CW development in P. densiflora, forming a foundation for future studies to enhance our comprehension of wood formation in gymnosperms.

16 December 2024 in Forests
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Tram Thi Thu NguyenTram Thi Thu Nguyen
Tram Thi Thu Nguyen
MKMin-Ha Kim
Min-Ha Kim
SPSeung-Won Pyo
Seung-Won Pyo
HJHyun-A Jang
Hyun-A Jang
HKHak-Jun Kim
Hak-Jun Kim
Jae-Heung KoJae-Heung Ko
Jae-Heung Ko
In conifers, compression wood (CW) with a high lignin content forms at the base of the stem or branch in response to gravity, which is a good model system for studying lignin-rich wood formation. In this study, we identified and characterized the laccase gene family (PdeLAC) in Korean red pine (Pinus densiflora), which is integral to monolignol polymerization. Phylogenetic analysis of 54 PdeLAC genes with those from gymnosperms (i.e., Pinus taeda and Picea abies) and angiosperms (i.e., Populus trichocarpa, Arabidopsis thaliana, and Oryza sativa) revealed their categorization into five groups, highlighting distinct evolutionary relationships compared to angiosperms. Gene structure and motif analysis showed conserved copper-binding loops and variable substrate-binding loops, suggesting functional diversity. Expression profiling indicated that 23 PdeLAC genes, including three (PdeLAC28, PdeLAC1, and PdeLAC31) homologous to AtLAC17, were upregulated in developing xylem during the growing season, particularly in CW. Transgenic poplars overexpressing PdeLAC28 exhibited increased xylem area, cell wall thickness, and Klason lignin content, underscoring its role in lignin biosynthesis and CW formation. This study provides valuable insights into the molecular regulation of lignin biosynthesis in CW of P. densiflora, setting a foundation for advancing our understanding of wood formation mechanisms in gymnosperms.

29 March 2023 in Journal of Plant Biology
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TATran Thi Ngoc Anh
Tran Thi Ngoc Anh
MKMin-Ha Kim
Min-Ha Kim
Tram Thi Thu NguyenTram Thi Thu Nguyen
Tram Thi Thu Nguyen
DYDeok-Chun Yang
Deok-Chun Yang
Jae-Heung KoJae-Heung Ko
Jae-Heung Ko