Viktoria Shcherbakova

Dr. Viktoria Shcherbakova

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Research Focus & Metrics

Academic Career Length

28Years (1999-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 June 2005 in FEMS Microbiology Ecology
Verified
Journal Article
Closed access
DGDavid Gilichinsky
David Gilichinsky
Elizaveta RivkinaElizaveta Rivkina
Elizaveta Rivkina
CBCorien Bakermans
Corien Bakermans
VSViktoria Shcherbakova
Viktoria Shcherbakova
LPLada Petrovskaya
Lada Petrovskaya
JTJames M. Tiedje
James M. Tiedje
This study describes the biodiversity of the indigenous microbial community in the sodium-chloride water brines (cryopegs) derived from ancient marine sediments and sandwiched within permafrost 100-120,000 years ago after the Arctic Ocean regression. Cryopegs remain liquid at the in situ temperature of -9 to -11 degrees C and make up the only habitat on the Earth that is characterized by permanently subzero temperatures, high salinity, and the absence of external influence during geological time. From these cryopegs, anaerobic and aerobic, spore-less and spore-forming, halotolerant and halophilic, psychrophilic and psychrotrophic bacteria, mycelial fungi and yeast were isolated and their activity was detected below 0 degrees C.

1 June 2003 in Astrobiology
Verified
Journal Article
Closed access
DGD. Gilichinsky
D. Gilichinsky
Elizaveta RivkinaElizaveta Rivkina
Elizaveta Rivkina
VSViktoria Shcherbakova
Viktoria Shcherbakova
KLK. Laurinavichuis
K. Laurinavichuis
JTJ. Tiedje
J. Tiedje
This study describes brine lenses (cryopegs) found in Siberian permafrost derived from ancient marine sediment layers of the Arctic Ocean. The cryopegs were formed and isolated from sediment ~100,000-120,000 years ago. They remain liquid at the in situ temperature of -10°C as a result of their high salt content (170-300 g/L). [14C] Glucose is taken up by the cryopeg biomass at -15°C, indicating microbial metabolism at low temperatures in this habitat. Furthermore, aerobic, anaerobic heterotrophs, sulfate reducers, acetogens, and methanogens were detected by most probable number analysis. Two psychrophilic microbes were isolated from the cryopegs, a Clostridium and a Psychrobacter. The closest relatives of each were previously isolated from Antarctica. The cryopeg econiche might serve as a model for extraterrestrial life, and hence is of particular interest to astrobiology.

1 July 2007 in FEMS Microbiology Ecology
Verified
Journal Article
Open access
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Elizaveta RivkinaElizaveta Rivkina
Elizaveta Rivkina
VSViktoria Shcherbakova
Viktoria Shcherbakova
KLKestas Laurinavichius
Kestas Laurinavichius
LPLada Petrovskaya
Lada Petrovskaya
KKKirill Krivushin
Kirill Krivushin
DGDavid Gilichinsky
David Gilichinsky
This study summarizes the findings of our research on the genesis of methane, its content and distribution in permafrost horizons of different age an

1 January 2004 in Advances In Space Research
Verified
Journal Article
Closed access
Elizaveta RivkinaElizaveta Rivkina
Elizaveta Rivkina
KLK. Laurinavichius
K. Laurinavichius
JMJ. McGrath
J. McGrath
JTJ. Tiedje
J. Tiedje
VSViktoria Shcherbakova
Viktoria Shcherbakova
DGD. Gilichinsky
D. Gilichinsky

1 December 2015 in International Journal of Systematic and Evolutionary Microbiology
Verified
Journal Article
Closed access
ASAndrey N Shkoporov
Andrey N Shkoporov
ACAndrei Viktorovich Chaplin
Andrei Viktorovich Chaplin
EKEkaterina V. Khokhlova
Ekaterina V. Khokhlova
VSViktoria Shcherbakova
Viktoria Shcherbakova
OMOksana V. Motuzova
Oksana V. Motuzova
BEBoris A. Efimov
Boris A. Efimov
Culture-based study of the faecal microbiome in two adult female subjects revealed the presence of two obligately anaerobic, non-spore-forming, rod-shaped, non-motile, Gram-negative bacterial strains that represent novel species. The first strain, designated 627T, was a fastidious, slow-growing, indole-positive bacterium with a non-fermentative type of metabolism. The strain was characterized by the production of acetic and succinic acids as metabolic end products, the prevalence of iso-C15 : 0fatty acid and the presence of menaquinones MK-10 and MK-11. The DNA G+C content was found to be 56.6 mol%. The second strain, designated 177T, was capable of fermenting a rich collection of carbohydrate substrates, producing acetic acid as a terminal product. The strain was indole-negative and resistant to bile. The major cellular fatty acids were iso-C15 : 0and anteiso-C15 : 0(in a 1 : 1 ratio) and the predominant menaquinone was MK-11. The DNA G+C content was 37.8 mol%. A phylogenomic analysis of the draft genomes of strains 627Tand 177Tplaced these bacteria in the generaAlistipes(familyRikenellaceae) andCoprobacter(familyPorphyromonadaceae), respectively.On the basis of the phenotypic and genotypic properties of strains 627Tand 177T, we conclude that these strains from human faeces represent two novel bacterial species, for which the namesAlistipes inopssp. nov. (type strain 627T = DSM 28863T = VKM B-2859T) andCoprobacter secundussp. nov. (type strain 177T = DSM 28864T = VKM B-2857T) are proposed.

1 February 2010 in International Journal of Systematic and Evolutionary Microbiology
Verified
Journal Article
Open access
KKKirill V. Krivushin
Kirill V. Krivushin
VSViktoria Shcherbakova
Viktoria Shcherbakova
LPLada E. Petrovskaya
Lada E. Petrovskaya
Elizaveta RivkinaElizaveta Rivkina
Elizaveta Rivkina
A methanogenic archaeon, strain MK4T, was isolated from ancient permafrost after long-term selective anaerobic cultivation. The cells were rods, 2.0–8.0 μm long and 0.40–0.45 μm wide, and stained Gram-negative. Optimal growth was observed at 28 °C and pH 7.0–7.2 and in 0.05 M NaCl. The isolate used H2plus CO2, methylamine plus H2and methanol plus H2as sources for growth and methanogenesis. Phylogenetic analysis of the 16S rRNA gene sequence of the strain showed close affinity withMethanobacterium bryantii(similarity >99 % to the type strain). On the basis of the level of DNA–DNA hybridization (62 %) between strain MK4TandMethanobacterium bryantiiVKM B-1629Tand phenotypic and phylogenetic differences, strain MK4Twas assigned to a novel species of the genusMethanobacterium,Methanobacterium veterumsp. nov., with the type strain MK4T(=DSM 19849T=VKM B-2440T).