Sagar Chittori

Sagar Chittori

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Sagar Chittori

St. Jude Children's Research Hospital

Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 August 2014 in Nature
Verified
Journal Article
Open access
PDF file
JMJoel R. Meyerson
Joel R. Meyerson
JKJanesh Kumar
Janesh Kumar
SCSagar Chittori
Sagar Chittori
PRPrashant Rao
Prashant Rao
JPJason Pierson
Jason Pierson
SSSriram Subramaniam
Sriram Subramaniam
Ionotropic glutamate receptors are ligand-gated ion channels that mediate excitatory synaptic transmission in the vertebrate brain. To gain a better understanding of how structural changes gate ion flux across the membrane, we trapped rat AMPA (α-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid) and kainate receptor subtypes in their major functional states and analysed the resulting structures using cryo-electron microscopy. We show that transition to the active state involves a ‘corkscrew’ motion of the receptor assembly, driven by closure of the ligand-binding domain. Desensitization is accompanied by disruption of the amino-terminal domain tetramer in AMPA, but not kainate, receptors with a two-fold to four-fold symmetry transition in the ligand-binding domains in both subtypes. The 7.6 Å structure of a desensitized kainate receptor shows how these changes accommodate channel closing. These findings integrate previous physiological, biochemical and structural analyses of glutamate receptors and provide a molecular explanation for key steps in receptor gating.

29 April 2021 in PLOS Biology
Verified
Journal Article
Open access
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XZXing Zhu
Xing Zhu
DMDhiraj Mannar
Dhiraj Mannar
SSShanti S. Srivastava
Shanti S. Srivastava
ABAlison M. Berezuk
Alison M. Berezuk
JDJean-Philippe Demers
Jean-Philippe Demers
SSSriram Subramaniam
Sriram Subramaniam
The recently reported “UK variant” (B.1.1.7) of SARS-CoV-2 is thought to be more infectious than previously circulating strains as a result of several changes, including the N501Y mutation. We present a 2.9-Å resolution cryo-electron microscopy (cryo-EM) structure of the complex between the ACE2 receptor and N501Y spike protein ectodomains that shows Y501 inserted into a cavity at the binding interface near Y41 of ACE2. This additional interaction provides a structural explanation for the increased ACE2 affinity of the N501Y mutant, and likely contributes to its increased infectivity. However, this mutation does not result in large structural changes, enabling important neutralization epitopes to be retained in the spike receptor binding domain. We confirmed this through biophysical assays and by determining cryo-EM structures of spike protein ectodomains bound to 2 representative potent neutralizing antibody fragments.

8 July 2019 in Nature Structural & Molecular Biology
Verified
Journal Article
Closed access
PDF file
XZXing Zhu
Xing Zhu
RCRyan Clarke
Ryan Clarke
APAnupama K. Puppala
Anupama K. Puppala
SCSagar Chittori
Sagar Chittori
AMAlan Merk
Alan Merk
SSSriram Subramaniam
Sriram Subramaniam

19 January 2018 in Science
Verified
Journal Article
Closed access
PDF file
SCSagar Chittori
Sagar Chittori
JHJingjun Hong
Jingjun Hong
HSHayden Saunders
Hayden Saunders
HFHanqiao Feng
Hanqiao Feng
RGRodolfo Ghirlando
Rodolfo Ghirlando
SSSriram Subramaniam
Sriram Subramaniam
Recognizing centromere by kinetochore: The kinetochore proteins CENP-N and CENP-C recognize the histone H3 variant CENP-A in the centromeric nucleosome. This ensures proper kinetochore assembly and accurate segregation of chromosomes. Chittori et al. describe the cryo-electron microscopy structure of the human CENP-A nucleosome-CENP-N complex. The interaction of CENP-N with CENP-A and the nucleosomal DNA together ensure specific and stable centromeric nucleosome recognition. Mutational analyses using both human and Xenopus CENP-A and CENP-N proteins suggest that the proteins have coevolved to preserve the interacting surfaces. Science , this issue p. 339

1 October 2020 in Cell
Verified
Journal Article
Closed access
WLWei Li
Wei Li
ASAlexandra Schäfer
Alexandra Schäfer
SKSwarali S. Kulkarni
Swarali S. Kulkarni
XLXianglei Liu
Xianglei Liu
DMDavid R. Martinez
David R. Martinez
DDDimiter S. Dimitrov
Dimiter S. Dimitrov

18 November 2014 in Scientific Reports
Verified
Journal Article
Open access
JMJoel R. Meyerson
Joel R. Meyerson
PRPrashant Rao
Prashant Rao
JKJanesh Kumar
Janesh Kumar
SCSagar Chittori
Sagar Chittori
SBSoojay Banerjee
Soojay Banerjee
SSSriram Subramaniam
Sriram Subramaniam
Poor partitioning of macromolecules into the holes of holey carbon support grids frequently limits structural determination by single particle cryo-electron microscopy (cryo-EM). Here, we present a method to deposit, on gold-coated carbon grids, a self-assembled monolayer whose surface properties can be controlled by chemical modification. We demonstrate the utility of this approach to drive partitioning of ionotropic glutamate receptors into the holes, thereby enabling 3D structural analysis using cryo-EM methods.