Stuart James Lucas

Stuart James Lucas

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Stuart James Lucas

SU Nanotechnology Research and Application Centre, Sabanci University, Istanbul, Turkey

Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 November 2010 in Planta
Verified
Journal Article
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MKMelda Kantar
Melda Kantar
SLStuart J. Lucas
Stuart J. Lucas
Hikmet BudakHikmet Budak
Hikmet Budak

13 December 2019 in Scientific Reports
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Journal Article
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SBShiv Bharadwaj
Shiv Bharadwaj
KLKyung Eun Lee
Kyung Eun Lee
Vivek Dhar DwivediVivek Dhar Dwivedi
Vivek Dhar Dwivedi
Umesh YadavaUmesh Yadava
Umesh Yadava
APAleksha Panwar
Aleksha Panwar
SKSang G. Kang
Sang G. Kang
Dengue virus (DENV) infection causes serious health problems in humans for which no drug is currently available. Recently, DENV NS2B-NS3 protease has been proposed as a primary target for anti-dengue drug discovery due to its important role in new virus particle formation by conducting DENV polyprotein cleavage. Triterpenoids from the medicinal fungus Ganoderma lucidum have been suggested as pharmacologically bioactive compounds and tested as anti-viral agents against various viral pathogens including human immunodeficiency virus. However, no reports are available concerning the anti-viral activity of triterpenoids from Ganoderma lucidum against DENV. Therefore, we employed a virtual screening approach to predict the functional triterpenoids from Ganoderma lucidum as potential inhibitors of DENV NS2B-NS3 protease, followed by an in vitro assay. From in silico analysis of twenty-two triterpenoids of Ganoderma lucidum, four triterpenoids, viz. Ganodermanontriol (−6.291 kcal/mol), Lucidumol A (−5.993 kcal/mol), Ganoderic acid C2 (−5.948 kcal/mol) and Ganosporeric acid A (−5.983 kcal/mol) were predicted to be viral protease inhibitors by comparison to reference inhibitor 1,8-Dihydroxy-4,5-dinitroanthraquinone (−5.377 kcal/mol). These results were further studied for binding affinity and stability using the molecular mechanics/generalized Born surface area method and Molecular Dynamics simulations, respectively. Also, in vitro viral infection inhibition suggested that Ganodermanontriol is a potent bioactive triterpenoid.

1 January 2013 in The Scientific World Journal
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AAAni Akpinar
Ani Akpinar
SLStuart J Lucas
Stuart J Lucas
Hikmet BudakHikmet Budak
Hikmet Budak
As sessile organisms, plants are inevitably exposed to one or a combination of stress factors every now and then throughout their growth and development. Stress responses vary considerably even in the same plant species; stress‐susceptible genotypes are at one extreme, and stress‐tolerant ones are at the other. Elucidation of the stress responses of crop plants is of extreme relevance, considering the central role of crops in food and biofuel production. Crop improvement has been a traditional issue to increase yields and enhance stress tolerance; however, crop improvement against abiotic stresses has been particularly compelling, given the complex nature of these stresses. As traditional strategies for crop improvement approach their limits, the era of genomics research has arisen with new and promising perspectives in breeding improved varieties against abiotic stresses.

15 November 2017 in Scientific Reports
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BHBabar Hussain
Babar Hussain
SLStuart James Lucas
Stuart James Lucas
LOLevent Ozturk
Levent Ozturk
Hikmet BudakHikmet Budak
Hikmet Budak
Soil salinization and degradation is one of the consequences of climate change. Identification of major salt tolerance genes and marker assisted selection (MAS) can accelerate wheat breeding for this trait. We genotyped 154 wheat F2 lines derived from a cross between salt tolerant and susceptible cultivars using the Axiom Wheat Breeder’s Genotyping Array. A high-density linkage map of 988 single nucleotide polymorphisms (SNPs) was constructed and utilized for quantitative trait loci (QTL) mapping for salt tolerance traits and mineral concentrations under salinity. Of 49 mapped QTLs, six were for Na+ exclusion (NAX) and two QTLs (qSNAX.2 A.1, qSNAX.2 A.2) on chromosome 2 A coincided with a reported major NAX QTL (Nax1 or HKT1;4). Two other major NAX QTLs were mapped on 7 A, which contributed 11.23 and 18.79% of the salt tolerance respectively. In addition to Ca+2 and Mg+2 QTLs, twenty-seven QTLs for tissue Phosphorus, Zinc, Iron, Manganese, Copper, Sulphur and Boron concentrations under salinity were also mapped. The 1293 segregating SNPs were annotated/located within genes for various ion channels, signalling pathways, transcription factors (TFs), metabolic pathways and 258 of them showed differential expression in silico under salinity. These findings will create new opportunities for salt tolerance breeding programs.

1 March 2011 in Plant Physiology and Biochemistry
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Journal Article
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SLStuart Lucas
Stuart Lucas
EDEmel Durmaz
Emel Durmaz
AAAni Akpinar
Ani Akpinar
Hikmet BudakHikmet Budak
Hikmet Budak

18 September 2012 in Plant Signaling & Behavior
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Journal Article
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AAAni Akpinar
Ani Akpinar
BABihter Avsar
Bihter Avsar
SLStuart J. Lucas
Stuart J. Lucas
Hikmet BudakHikmet Budak
Hikmet Budak
Stress signaling is central to plants which—as immobile organisms—have to endure environmental fluctuations that constantly interfere with vigorous growth. As a result, plant-specific, elaborate mechanisms have evolved to perceive and respond to stress conditions. Currently, these stress responses are plausibly being revealed to involve crosstalks with energy signaling pathways as any growth-limiting factor alters plant’s energy status. Among these, autophagy, conventionally regarded as the mechanism whereby plants recycle and remobilize nutrients in bulk, has frequently been associated with stress responses. With the recent discoveries, however, autophagy has attained a novel role in stress signaling. In this review, major elements of abitoic stress signaling are summarized along with autophagy pathway, and in the light of recent discoveries, a putative, state-of-art role of autophagy is discussed.