Ravi Ojha

Ravi Ojha

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Ravi Ojha

University of Helsinki

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 November 2020 in Science
Verified
Journal Article
Open access
PDF file
LCLudovico Cantuti-Castelvetri
Ludovico Cantuti-Castelvetri
RORavi Ojha
Ravi Ojha
LPLiliana D. Pedro
Liliana D. Pedro
MDMinou Djannatian
Minou Djannatian
JFJonas Franz
Jonas Franz
MSMikael Simons
Mikael Simons
Another host factor for SARS-CoV-2: Virus-host interactions determine cellular entry and spreading in tissues. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and the earlier SARS-CoV use angiotensin-converting enzyme 2 (ACE2) as a receptor; however, their tissue tropism differs, raising the possibility that additional host factors are involved. The spike protein of SARS-CoV-2 contains a cleavage site for the protease furin that is absent from SARS-CoV (see the Perspective by Kielian). Cantuti-Castelvetri et al. now show that neuropilin-1 (NRP1), which is known to bind furin-cleaved substrates, potentiates SARS-CoV-2 infectivity. NRP1 is abundantly expressed in the respiratory and olfactory epithelium, with highest expression in endothelial and epithelial cells. Daly et al. found that the furin-cleaved S1 fragment of the spike protein binds directly to cell surface NRP1 and blocking this interaction with a small-molecule inhibitor or monoclonal antibodies reduced viral infection in cell culture. Understanding the role of NRP1 in SARS-CoV-2 infection may suggest potential targets for future antiviral therapeutics. Science , this issue p. 856 , p. 861 ; see also p. 765

13 October 2021 in Journal of Virology
Verified
Journal Article
Closed access
AKAlex J B Kreutzberger
Alex J B Kreutzberger
ASAnwesha Sanyal
Anwesha Sanyal
RORavi Ojha
Ravi Ojha
JPJesse D Pyle
Jesse D Pyle
OVOlli Vapalahti
Olli Vapalahti
TKTom Kirchhausen
Tom Kirchhausen
Infection by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is causing the coronavirus disease 2019 (COVID-2019) global pandemic. There are ongoing efforts to uncover effective antiviral agents that could mitigate the severity of the disease by controlling the ensuing viral replication.

27 April 2023 in Journal of Virology
Verified
Journal Article
Open access
PKPinja Kettunen
Pinja Kettunen
ALAngelina Lesnikova
Angelina Lesnikova
NRNoora Räsänen
Noora Räsänen
RORavi Ojha
Ravi Ojha
LPLeena Palmunen
Leena Palmunen
GBGiuseppe Balistreri
Giuseppe Balistreri
COVID-19 is a disease caused by the coronavirus SARS-CoV-2. Millions of patients display neurological symptoms, including headache, impairment of memory, seizures, and encephalopathy, as well as anatomical abnormalities, such as changes in brain morphology.

27 December 2021 in Briefings in Bioinformatics
Verified
Journal Article
Open access
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ASAngela Serra
Angela Serra
MFMichele Fratello
Michele Fratello
Antonio FedericoAntonio Federico
Antonio Federico
RORavi Ojha
Ravi Ojha
RPRiccardo Provenzani
Riccardo Provenzani
Dario  GrecoDario Greco
Dario Greco
The pharmacological arsenal against the COVID-19 pandemic is largely based on generic anti-inflammatory strategies or poorly scalable solutions. Moreover, as the ongoing vaccination campaign is rolling slower than wished, affordable and effective therapeutics are needed. To this end, there is increasing attention toward computational methods for drug repositioning and de novo drug design. Here, multiple data-driven computational approaches are systematically integrated to perform a virtual screening and prioritize candidate drugs for the treatment of COVID-19. From the list of prioritized drugs, a subset of representative candidates to test in human cells is selected. Two compounds, 7-hydroxystaurosporine and bafetinib, show synergistic antiviral effects in vitro and strongly inhibit viral-induced syncytia formation. Moreover, since existing drug repositioning methods provide limited usable information for de novo drug design, the relevant chemical substructures of the identified drugs are extracted to provide a chemical vocabulary that may help to design new effective drugs.

17 August 2023 in Microbiology Spectrum
Verified
Journal Article
Open access
MLMira Laajala
Mira Laajala
MZMarleen Zwaagstra
Marleen Zwaagstra
MMMari Martikainen
Mari Martikainen
MNMagloire Pandoua Nekoua
Magloire Pandoua Nekoua
MBMehdi Benkahla
Mehdi Benkahla
VMVarpu Marjomäki
Varpu Marjomäki
Despite the prevalence and medical threat of enteroviruses, presently, there are no antivirals against them. Here, we show that vemurafenib, an FDA-approved RAF kinase inhibitor for treating BRAF V600E mutant-related melanoma, prevents enterovirus translation and replication.

16 September 2022 in bioRxiv
Verified
Preprint
Open access
PDF file
PKPinja Pauliina Kettunen
Pinja Pauliina Kettunen
ALAngelina Lesnikova
Angelina Lesnikova
NRNoora Räsänen
Noora Räsänen
RORavi Ojha
Ravi Ojha
LPLeena Palmunen
Leena Palmunen
GBGiuseppe Balistreri
Giuseppe Balistreri
COVID-19 is a disease caused by coronavirus SARS-CoV-2. In addition to respiratory illness, COVID-19 patients exhibit neurological symptoms that can last from weeks to months (long COVID). It is unclear whether these neurological manifestations are due to infection of brain cells. We found that a small fraction of cortical neurons, but not astrocytes, were naturally susceptible to SARS-CoV-2. Based on the inhibitory effect of blocking antibodies, the infection seemed to depend on the receptor angiotensin-converting enzyme 2 (ACE2), which was expressed at very low levels. Although only a limited number of neurons was infectable, the infection was productive, as demonstrated by the presence of double-stranded RNA in the cytoplasm (the hallmark of viral replication), abundant synthesis of viral late genes localized throughout the neuronal cell, and an increase in viral RNA in the culture medium within the first 48 h of infection (viral release). The productive entry of SARS-CoV-2 requires the fusion of the viral and cellular membranes, which results in the delivery of viral genome into the cytoplasm of the target cell. The fusion is triggered by proteolytic cleavage of the viral surface protein spike, which can occur at the plasma membrane or from endo/lysosomes. Using specific combinations of small-molecule inhibitors, we found that SARS-CoV-2 infection of human neurons was insensitive to nafamostat and camostat, which inhibit cellular serine proteases found on the cell surface, including TMPRSS2. In contrast, the infection was blocked by apilimod, an inhibitor of phosphatidyl-inositol 5 kinase (PIK5K) that regulates endosomal maturation. Importance: COVID-19 is a disease caused by coronavirus SARS-CoV-2. Millions of patients display neurological symptoms, including headache, impairment of memory, seizures and encephalopathy, as well as anatomical abnormalities such as changes in brain morphology. Whether these symptoms are linked to brain infection is not clear. The mechanism of the virus entry into neurons has also not been characterized. Here we investigated SARS-CoV-2 infection using a human iPSC-derived neural cell model and found that a small fraction of cortical neurons was naturally susceptible to infection. The infection depended on the ACE2 receptor and was productive. We also found that the virus used the late endosomal/lysosomal pathway for cell entry and that the infection could be blocked by apilimod, an inhibitor of the cellular phosphatidyl-inositol 5 kinase.