Charles Eliot Timothy Paine

Charles Eliot Timothy Paine

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Charles Eliot Timothy Paine

Environmental and Rural Science University of New England Armidale NSW Australia

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 December 2019 in Global Change Biology
Verified
Journal Article
Open access
JKJens Kattge
Jens Kattge
GBGerhard Bönisch
Gerhard Bönisch
SDSandra Díaz
Sandra Díaz
SLSandra Lavorel
Sandra Lavorel
IPIain Colin Prentice
Iain Colin Prentice
CWChristian Wirth
Christian Wirth
Plant traits—the morphological, anatomical, physiological, biochemical and phenological characteristics of plants—determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait‐based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits—almost complete coverage for ‘plant growth form’. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait–environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives.

28 May 2013 in PLOS Biology
Verified
Journal Article
Open access
PDF file
DMDavid Mouillot
David Mouillot
DBDavid R. Bellwood
David R. Bellwood
CBChristopher Baraloto
Christopher Baraloto
JCJerome Chave
Jerome Chave
RGRene Galzin
Rene Galzin
WTWilfried Thuiller
Wilfried Thuiller
Around the world, the human-induced collapses of populations and species have triggered a sixth mass extinction crisis, with rare species often being the first to disappear. Although the role of species diversity in the maintenance of ecosystem processes has been widely investigated, the role of rare species remains controversial. A critical issue is whether common species insure against the loss of functions supported by rare species. This issue is even more critical in species-rich ecosystems where high functional redundancy among species is likely and where it is thus often assumed that ecosystem functioning is buffered against species loss. Here, using extensive datasets of species occurrences and functional traits from three highly diverse ecosystems (846 coral reef fishes, 2,979 alpine plants, and 662 tropical trees), we demonstrate that the most distinct combinations of traits are supported predominantly by rare species both in terms of local abundance and regional occupancy. Moreover, species that have low functional redundancy and are likely to support the most vulnerable functions, with no other species carrying similar combinations of traits, are rarer than expected by chance in all three ecosystems. For instance, 63% and 98% of fish species that are likely to support highly vulnerable functions in coral reef ecosystems are locally and regionally rare, respectively. For alpine plants, 32% and 89% of such species are locally and regionally rare, respectively. Remarkably, 47% of fish species and 55% of tropical tree species that are likely to support highly vulnerable functions have only one individual per sample on average. Our results emphasize the importance of rare species conservation, even in highly diverse ecosystems, which are thought to exhibit high functional redundancy. Rare species offer more than aesthetic, cultural, or taxonomic diversity value; they disproportionately increase the potential breadth of functions provided by ecosystems across spatial scales. As such, they are likely to insure against future uncertainty arising from climate change and the ever-increasing anthropogenic pressures on ecosystems. Our results call for a more detailed understanding of the role of rarity and functional vulnerability in ecosystem functioning. In ecological systems most species are rare—that is, represented by only a few individuals or restricted to particular habitats—and are vulnerable to being lost. Yet the ecological consequences of such biodiversity loss are often overlooked and remain controversial. In the best-case scenario, the functions that these rare species provide to their ecosystems might be insured by more common species, which share combinations of functional traits with the rare species, thereby helping to maintain ecosystem functioning despite rare species loss. In the worst-case scenario, rare species would have functional traits that are distinct from those of common species; thus, the functions they support would also be vulnerable to extinction. We examined three highly diverse ecosystems (coral reefs, alpine meadows, and tropical forests) and addressed whether common species would insure against the loss of functions carried by rare species. We demonstrate that highly distinct combinations of traits are supported predominantly by rare species. It is thus not only the quantity but also the quality of biodiversity that matters. Thus, our findings highlight that we need to change how we think about biodiversity in general, and about conservation strategies in particular, by moving beyond the protection of biodiversity per se and beyond focusing on iconic, charismatic, or phylogenetically distinct species, to protecting species that support irreplaceable functional roles and associated services.

29 September 2011 in Methods in Ecology and Evolution
Verified
Journal Article
Open access
PDF file
CPC. E. Timothy Paine
C. E. Timothy Paine
Toby Richard MarthewsToby Richard Marthews
Toby Richard Marthews
DVDeborah Vogt
Deborah Vogt
DPDrew Purves
Drew Purves
MRMark Rees
Mark Rees
LTLindsay A. Turnbull
Lindsay A. Turnbull
Summary: 1. Plant growth is a fundamental ecological process, integrating across scales from physiology to community dynamics and ecosystem properties. Recent improvements in plant growth modelling have allowed deeper understanding and more accurate predictions for a wide range of ecological issues, including competition among plants, plant–herbivore interactions and ecosystem functioning.2. One challenge in modelling plant growth is that, for a variety of reasons, relative growth rate (RGR) almost universally decreases with increasing size, although traditional calculations assume that RGR is constant. Nonlinear growth models are flexible enough to account for varying growth rates.3. We demonstrate a variety of nonlinear models that are appropriate for modelling plant growth and, for each, show how to calculate function‐derived growth rates, which allow unbiased comparisons among species at a common time or size. We show how to propagate uncertainty in estimated parameters to express uncertainty in growth rates. Fitting nonlinear models can be challenging, so we present extensive worked examples and practical recommendations, all implemented in R.4. The use of nonlinear models coupled with function‐derived growth rates can facilitate the testing of novel hypotheses in population and community ecology. For example, the use of such techniques has allowed better understanding of the components of RGR, the costs of rapid growth and the linkage between host and parasite growth rates. We hope this contribution will demystify nonlinear modelling and persuade more ecologists to use these techniques.

29 August 2010 in Ecology Letters
Verified
Journal Article
Closed access
PDF file
CBChristopher Baraloto
Christopher Baraloto
CPC. E. Timothy Paine
C. E. Timothy Paine
LPLourens Poorter
Lourens Poorter
JBJacques Beauchene
Jacques Beauchene
DBDamien Bonal
Damien Bonal
JCJerome Chave
Jerome Chave

1 June 2008 in Ecology
Verified
Journal Article
Open access
PDF file
JTJohn Terborgh
John Terborgh
GNGabriela Nuñez-Iturri
Gabriela Nuñez-Iturri
NPNigel C. A. Pitman
Nigel C. A. Pitman
FVFernando H. Cornejo Valverde
Fernando H. Cornejo Valverde
PAPatricia Alvarez
Patricia Alvarez
CPC. E. Timothy Paine
C. E. Timothy Paine
To assess how the decimation of large vertebrates by hunting alters recruitment processes in a tropical forest, we compared the sapling cohorts of two structurally and compositionally similar forests in the Rio Manu floodplain in southeastern Peru. Large vertebrates were severely depleted at one site, Boca Manu (BM), whereas the other, Cocha Cashu Biological Station (CC), supported an intact fauna. At both sites we sampled small (≥1 m tall, <1 cm dbh) and large (≥1 cm and <10 cm dbh) saplings in the central portion of 4‐ha plots within which all trees ≥10 cm dbh were mapped and identified. This design ensured that all conspecific adults within at least 50 m (BM) or 55 m (CC) of any sapling would have known locations. We used the Janzen‐Connell model to make five predictions about the sapling cohorts at BM with respect to CC: (1) reduced overall sapling recruitment, (2) increased recruitment of species dispersed by abiotic means, (3) altered relative abundances of species, (4) prominence of large‐seeded species among those showing depressed recruitment, and (5) little or no tendency for saplings to cluster closer to adults at BM. Our results affirmed each of these predictions. Interpreted at face value, the evidence suggests that few species are demographically stable at BM and that up to 28% are increasing and 72% decreasing. Loss of dispersal function allows species dispersed abiotically and by small birds and mammals to substitute for those dispersed by large birds and mammals. Although we regard these conclusions as preliminary, over the long run, the observed type of directional change in tree composition is likely to result in biodiversity loss and negative feedbacks on both the animal and plant communities. Our results suggest that the best, and perhaps only, way to prevent compositional change and probable loss of diversity in tropical tree communities is to prohibit hunting.

14 March 2012 in Journal of Ecology
Verified
Journal Article
Closed access
CBChristopher Baraloto
Christopher Baraloto
OHOlivier J. Hardy
Olivier J. Hardy
CPC. E. Timothy Paine
C. E. Timothy Paine
KDKyle G. Dexter
Kyle G. Dexter
CCCorinne Cruaud
Corinne Cruaud
JCJerome Chave
Jerome Chave