Yang Liu

Yang Liu

Auto-generated profile, based on publicly available information

Yang Liu

BGI Research, Hangzhou 310030, China

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 September 2022 in Science
Verified
Journal Article
Closed access
XWXiaoyu Wei
Xiaoyu Wei
SFSulei Fu
Sulei Fu
HLHanbo Li
Hanbo Li
YLYang Liu
Yang Liu
SWShuai Wang
Shuai Wang
YGYing Gu
Ying Gu
The molecular mechanism underlying brain regeneration in vertebrates remains elusive. We performed spatial enhanced resolution omics sequencing (Stereo-seq) to capture spatially resolved single-cell transcriptomes of axolotl telencephalon sections during development and regeneration. Annotated cell types exhibited distinct spatial distribution, molecular features, and functions. We identified an injury-induced ependymoglial cell cluster at the wound site as a progenitor cell population for the potential replenishment of lost neurons, through a cell state transition process resembling neurogenesis during development. Transcriptome comparisons indicated that these induced cells may originate from local resident ependymoglial cells. We further uncovered spatially defined neurons at the lesion site that may regress to an immature neuron–like state. Our work establishes spatial transcriptome profiles of an anamniote tetrapod brain and decodes potential neurogenesis from ependymoglial cells for development and regeneration, thus providing mechanistic insights into vertebrate brain regeneration.

22 November 2024 in Science Advances
Verified
Journal Article
Open access
XWXin Wang
Xin Wang
QSQian Sun
Qian Sun
TLTianbin Liu
Tianbin Liu
HLHaoran Lu
Haoran Lu
XLXuyi Lin
Xuyi Lin
LCLiang Chen
Liang Chen
Glioblastoma (GBM) cells are highly heterogeneous and invasive, leading to treatment resistance and relapse. However, the molecular regulation in and distal to tumors remains elusive. Here, we collected paired tissues from the tumor core (TC) and peritumoral brain (PTB) for integrated snRNA-seq and snATAC-seq analyses. Tumor cells infiltrating PTB from TC behave more like oligodendrocyte progenitor cells than astrocytes at the transcriptome level. Dual-omics analyses further suggest that the distal regulatory regions in the tumor genome and specific transcription factors are potential determinants of regional heterogeneity. Notably, while activator protein 1 (AP-1) is active in all GBM states, its activity declines from TC to PTB, with another transcription factor, BACH1, showing the opposite trend. Combined inhibition of AP-1 and BACH1 more efficiently attenuates the tumor progression in mice and prolongs survival than either single-target treatment. Together, our work reveals marked molecular alterations of infiltrated GBM cells and a synergy of combination therapy targeting intratumor heterogeneity in and distal to GBM.


1 January 2022 in Traditional Medicine Research
Verified
Journal Article
Open access
YLYang Liu
Yang Liu
HWHao Wang
Hao Wang
YWYan Wang
Yan Wang
LXLixiang Xue
Lixiang Xue