10 March 2019 in Methods in Ecology and Evolution
Biological coloration presents a canvas for the study of ecological and evolutionary processes. Enduring interest in colour‐based phenotypes has driven, and been driven by, improved techniques for quantifying colour patterns in ever‐more relevant ways, yet the need for flexible, open frameworks for data processing and analysis persists. Here we introduce pavo 2, the latest iteration of the r package pavo . This release represents the extensive refinement and expansion of existing methods, as well as a suite of new tools for the cohesive analysis of the spectral and (now) spatial structure of colour patterns and perception. At its core, the package retains a broad focus on (a) the organization and processing of spectral and spatial data, and tools for the alternating (b) visualization, and (c) analysis of data. Significantly, pavo 2 introduces image‐analysis capabilities, providing a cohesive workflow for the comprehensive analysis of colour patterns. We demonstrate the utility of pavo with a brief example centred on mimicry in Heliconius butterflies. Drawing on visual modelling, adjacency, and boundary strength analyses, we show that the combined spectral (colour and luminance) and spatial (pattern element distribution and boundary salience) features of putative models and mimics are closely aligned. pavo 2 offers a flexible and reproducible environment for the analysis of colour, with renewed potential to assist researchers in answering fundamental questions in sensory ecology and evolution.
22 March 2009 in Nature Photonics
18 April 2008 in Optics Express
We present a systematic procedure for designing “flat bands” of photonic crystal waveguides for slow light propagation. The procedure aims to maximize the group index - bandwidth product by changing the position of the first two rows of holes of W1 line defect photonic crystal waveguides. A nearly constant group index - bandwidth product is achieved for group indices of 30-90 and as an example, we experimentally demonstrate flat band slow light with nearly constant group indices of 32.5, 44 and 49 over 14 nm, 11 nm and 9.5 nm bandwidth around 1550 nm, respectively.
14 September 2018 in Advanced Energy Materials
4 April 2017 in Advanced Energy Materials
1 October 2002 in Journal of the Optical Society of America B
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